Camelina sativa (false flax): 104731985
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Entry
104731985 CDS
T05044
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104731985
Membrane trafficking [BR:
csat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104731985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
104731985
NCBI-ProteinID:
XP_010449806
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All DBs
Position
12:16931001..16944272
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AA seq
1829 aa
AA seq
DB search
MENNNLGLRFRKIPRQPVALPKLDPLLDENLEQWPHLNQLVQCYGTEWVKDVNKYGHYEN
TRPDTFQSQIFEGPDTDTETEIRLASARSATIEEDVASISGRPFSDSGSSKHFGQPPLPA
YEPAFDWENERAMIFGQRTPESPAASYSSGLKISVRVLSLAFQSGLVEPFFGSIALYNQE
RKEKLSEDFYFHILPTEMQDARLSSENRGVFYLDAPSASVCLLIQLEKTATEEGGVTTSV
YSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAVVPLFDNNITTNTGESASPSSPLAPSM
TASSSHDGAFEPIAKITSDGKQGYSGGSSVVVEISNLNKVKESYSEESIQDPKRKVHKPV
KGVLRLEIEKHRNGHGDFEDLSENGSIINDSLDPTDRLSDLTLTKCPSSGSGGPRSGCSK
WNSEDAKDVSRNLTSSSGTADLNCYHAFDFCSTTRNEPFQHLFHCLYVYPVAVTLSRKRN
PFIRVELRKDDTDVRKQPLEAIYPREPGVSLQKWVHTQVAVGARAASYHDEIKVSLPATW
TPSHHLLFTFFHVDLQTKLEAPRPVVVGYASLPLSTYIHSRSDISLPVMRELVPHYLQET
TKERLDYLEDGKTIFKLRLRLCSSLYPTNERVRDFCLEYDRHTLRTNPPWGSELLQAINS
LKHVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVDILTRVQQVSFDDADRNRFL
VTYVDYSFDDFGGNQPPVYPGLATVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKS
MALEQARLYDHNLPSGEDVPPMQLKESVFRCIMQLFDCLLTEVHERCKKGLSLAKRLNSS
LAFFCYDLLYIIEPCQVYELVSLYMDKFSGVCQSVLHECKLTFLQIISDHDLFVEMPGRD
PSDRNYLSSILIQELFLSLDHDELPLRAKGARILVILLCKHEFDARYQKAEDKLYIAQLY
FPFVGQILDEMPVFYNLNATEKREVLIGVLQIVRNLDDTSLVKAWQQSIARTRLYFKLME
ECLILFEHKKADSILGGNNSRGPISEGAGSPKYSERLSPAINNYLSEASRQEVRLEGTPD
NGYLWQRVNSQLASPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENVS
ATVSLQVLEITEKFSSMAASHNIATDYGKLDCVTTILTSFFSRNQSLAFWKAFFPIFNRI
FDLHGATLMARENDRFLKQIAFHLLRLAVYRNDSVRKRAVIGLQILVKSSLYFMQTARLR
ALLTITLSELMSDVQVTHMKTDNTLEESGEARRLQQSLSEMADEAKSVNLLRECGLPDDT
LLIIPEKFTENRWSWDEVKHLSDSLVLALDASLGHALLGSVMAMDRYAAAESFYKLGMAF
APVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVARNDGVWSKDHVSSLRK
ICPMVSGEFTTEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVIP
VYKSRKAYGQLAKCHTLLTNIYESILDQESNPIPFIDATYYRVGFYGEKFGKLDRKEYVY
REPRDVRLGDIMEKLSHIYESRMDSNHILHIIPDSRQVKAEELQAGACYLQITAVDAVME
DEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFP
ALVNRLLVTKSESLEFSPVENAIGMIETRTTALRNELEEPRSSDGDHLPRLQSLQRILQG
SVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEED
QEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacaatcttggtcttcgttttcgtaagatacctcgtcaacctgttgctctc
cctaagctcgatcctttgcttgatgagaatctggaacaatggccgcatttgaaccaattg
gttcaatgctatggcactgaatgggttaaagatgttaataaatatggacactatgaaaac
actcgacctgatactttccagagtcagatttttgaaggacctgacactgatactgagact
gaaattcgtcttgctagtgctaggagtgcaaccattgaagaggatgtagctagcatttct
gggaggcctttttctgattctggatcctccaagcactttgggcaacctcccctccctgct
tatgaaccagcttttgactgggaaaatgaaagagctatgatatttggccagagaactcct
gaatcacctgcagctagctattccagtggattgaagatctcggttagagttttgtctcta
gcttttcagtctggcttagttgaaccattttttggctcaattgcattgtacaatcaagag
aggaaggagaaactctctgaggatttttatttccatattttgccgacggaaatgcaggat
gctagactttcttctgaaaatcgtggagtattttatctagatgccccatcagcttctgtt
tgcctgcttattcaattagaaaaaacagcaacagaggagggaggcgttacaacatctgtc
tattcccgtaaagagcctgtgcacttaactgagagggaaaagcaaaagttgcaggtctgg
tctcgcattatgccttaccgagagtcttttgcttgggcagttgttccactttttgataat
aatatcaccacaaacactggtgaatctgcttcccctagcagtcctcttgctcccagtatg
actgcgtcaagttctcatgatggtgcttttgaacccattgcaaagatcacatcagatgga
aagcaaggttattcaggtggaagttctgtcgtagttgaaatatctaatttaaacaaagtt
aaagagagctactctgaagagtcaattcaggaccccaaacgaaaggttcacaaacctgtt
aaaggggttctaagactggaaattgagaaacatcggaatggacatggagactttgaagat
ctatctgaaaatggaagtatcattaatgactcccttgatccgactgaccgcctcagtgac
ctgacacttacgaagtgtcccagttctggttctggcggaccccgtagtggctgttcgaag
tggaattcagaggacgcaaaggatgtttcgagaaacctaactagttcaagtgggactgct
gacttaaattgttatcatgcttttgatttctgctctacgacaagaaacgagccttttcaa
catctcttccattgcctttatgtgtatcctgtagctgttactttaagtcggaagaggaat
ccctttattcgtgtagaattgagaaaggatgacacagatgtccgaaaacaaccactcgag
gcaatttatccaagagaacctggtgtttcacttcagaagtgggttcatacacaggttgct
gttggtgctagggctgctagctaccatgatgaaattaaggtgtctcttcctgccacatgg
acgccatcacatcatctgttgttcactttttttcatgttgatctccagacaaagctagaa
gctccaagaccagtagttgttggatatgcatcacttccattatctacctatattcactca
cggtctgatatttctctaccagtaatgagagaactggttccccactatcttcaggaaacc
accaaggagaggttggattatttggaagatggcaagactatttttaagttgcgactgaga
ctttgttcatctctttatccaaccaatgaacgtgtcagggatttctgtctagagtatgat
agacataccctccggacaaaccctccctggggttcagaactgttgcaggcaataaacagt
ttgaagcacgttgattctactgccttgcttcagtttctttacccaattcttaacatgctc
cttcatcttattggcaatggtggagaaactcttcaggttgcagcattcagagccatggtg
gatattttaactcgggtgcagcaggtgtcgtttgatgatgctgaccgaaatcggtttctg
gtcacctatgttgattattcttttgatgattttggaggcaatcaacctccagtttatcct
ggattagcaactgtatggggaagtttagctagaagcaaggctaaaggttaccgggttgga
cctgtatatgacgacgtattatcgatggcgtggtttttccttgagttgattgttaaatca
atggcattggagcaggcacgtctctatgatcacaatctaccttcaggcgaggatgttcca
cccatgcagctcaaagaaagtgtattccgatgtatcatgcaattgtttgattgcctttta
actgaagtacatgaacgttgtaaaaagggcttaagcttggcaaaacgtctgaacagcagt
ttggccttcttctgttatgatcttttatatatcattgagccctgccaagtctatgaactg
gtatcattatacatggacaagttttctggtgtttgtcaatccgttctacacgaatgcaag
ctcacgtttttgcaaattatctccgaccatgatctttttgtagaaatgcctggcagagac
ccatcagacaggaattatttatcatccatattaatacaagagttatttctctccctggat
catgatgagctgcctctgcgggcgaagggagcaagaattttagtgatcctcttgtgcaaa
catgagtttgatgcgcggtaccagaaagccgaagataagctgtacattgcacaactatat
tttcctttcgtcgggcagattttagatgaaatgcctgtattttataacctaaatgctact
gaaaagcgtgaggttttaattggtgtgctgcaaattgttcgtaatctggatgacacatca
cttgtcaaggcatggcagcagagcatcgctcgtactagattgtatttcaaactcatggaa
gaatgcctcatacttttcgagcacaagaaggctgacagcatcctcggaggcaacaattct
cgtgggcctattagtgaaggagctggatcaccaaagtactccgagcgactttctcctgct
atcaacaattatctgtcagaagcttctcgccaagaagtcaggctagagggaacacctgat
aatgggtacctgtggcagagagttaattctcagttggcctcccctagccaaccttattct
ctaagagaagctttagcgcaagcacaatcgtcgcggattggagcttcagcccaggcacta
agagaatcgttgcaccctattttgaggcaaaaactggaactttgggaagagaatgtaagt
gccacagttagcctccaggttttggagatcactgagaaattttcatcaatggcagcctct
cacaatattgcgacggactatggcaaattggactgcgttactacaatattgacgagtttc
ttctctcgaaaccagtcactagccttctggaaagccttctttccaattttcaacagaatc
tttgatcttcatggggctacactaatggccagggaaaatgatcgcttcttaaaacagata
gccttccatcttctccggcttgctgtttaccgcaatgacagtgtcaggaaaagggctgtt
attggtcttcaaatattagttaagagctcgctatactttatgcagactgctaggctcagg
gctttgctgacaattacactgtcagaactcatgtcggatgtccaagtgactcatatgaaa
acagataatacattagaagagagtggagaggcacggcggcttcaacagtcattaagcgaa
atggctgatgaagctaagagtgtcaatttgttgagggagtgtggtcttcctgatgataca
ctgttgataattcccgagaaatttactgagaaccgctggtcatgggatgaagtgaaacat
ctttctgacagccttgttcttgctcttgatgccagcctcgggcatgcccttttgggatct
gtgatggctatggatcgatatgctgcggctgagagcttctacaaacttggaatggcattt
gctcctgttcctgatcttcacataatgtggttgctgcatttatgtgatgcccaccaggaa
atgcagtcttgggctgaagctgcacagtgtgctgtcgcggttgcaggtgttataatgcag
gccttggtggctagaaatgatggtgtgtggagcaaggatcatgtgtcttccttgcgtaag
atttgccctatggtaagtggcgagtttacaacagaggcatctgcagctgaagtcgagggt
tatggtgcttcaaagctaacagttgactccgccgtcaagtatctacagcttgctaataag
cttttctctcaagctgagctctaccatttttgtgccagcattttggaacttgttattcca
gtttacaagagcaggaaggcttatgggcagttggctaagtgtcacactttacttaccaat
atatacgagtctattcttgaccaagaatcaaacccaatcccatttatcgatgctacatat
taccgggtgggattttacggggaaaagtttgggaagttggacaggaaagaatatgtatat
cgagaaccacgagatgtgcggctaggggatataatggaaaagctgagccatatttatgaa
tcaagaatggacagcaaccatattctgcacattataccagattcgagacaagtgaaggca
gaagaattgcaggcaggagcgtgctacctgcaaattacggctgttgatgcagtgatggaa
gatgaggatcttgggagcagaagagagaggatattttctctctcgactggaagtgttcgc
gcacgagtgtttgatcgcttcttgtttgacacaccatttacaaaaaatggtaagacacaa
ggaggattagaagatcaatggaagagaagaacagtgctgcagacggagggttcattccct
gcccttgtgaataggctgttggttaccaagtctgaatcccttgaattctcgccagtggag
aatgcgatcggaatgattgaaacgcggaccactgctctgagaaatgagctagaggagcct
cgtagctcagatggggatcacctaccacggcttcaaagtctgcagaggattctccaagga
agtgttgcagtacaggtgaacagtggggtgttgagcgtgtgcacagctttcttatcagga
gagcccgcaactagactgcgttcgcaggaactgcagcaactgatagcggcactgcttgaa
ttcatggcagtatgtaagcgagccattagggttcactttagattaattggggaagaagat
caggaattccatacgcagcttgtcaatggatttcagtctctcaccgcagaactctcacat
tacattcctgctatcttgtccgaactttag
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integrated database retrieval system
