KEGG   Camelina sativa (false flax): 104732045
Entry
104732045         CDS       T05044                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03020  RNA polymerase
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104732045
  09124 Replication and repair
   03420 Nucleotide excision repair
    104732045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104732045
   03400 DNA repair and recombination proteins [BR:csat03400]
    104732045
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     104732045
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104732045
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF5044
Other DBs
NCBI-GeneID: 104732045
NCBI-ProteinID: XP_010449874
UniProt: A0ABM0V2M2
LinkDB
Position
12:complement(17601842..17603429)
AA seq 204 aa
MSEKGGKGLKSSLKSKDGGKDGNSTNPKKGRKIHFDQQGTPAPNYKMLNGSDQPFQSSTS
KGGKADKPTKSSKSSLQSFDLKDLPENAECMMDCEAFQILDGIKGHLVGLSEDPSIKIPV
SYHRAVAYVESCVLYSNPQSVRQALEPLKTHGISDGEMCVIANASPDTVDEVLAFIPSLK
AKKEVLNQPLQDALVELSKLKKSE
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtcagagaaaggaggcaaagggctcaaatcctctctcaagtccaaagatggagggaag
gatgggaactcaacaaacccaaagaagggtagaaaaatccactttgatcaacaagggacc
ccagcacctaattataagatgctcaacggttctgatcaaccatttcagagttctacttct
aaaggtggcaaagcagacaaacctaccaagtctagcaaaagctctctgcaatcgtttgac
ctcaaagatcttcctgagaacgctgaatgcatgatggattgtgaagcttttcagatatta
gatggaattaaggggcatttggttgggttgtctgaagacccatccattaaaattcctgtg
tcgtatcacagagcagtagcttatgtggagagttgtgttctttactcaaaccctcaatct
gtcagacaagctcttgaacctcttaaaacacatggtatctctgatggcgagatgtgtgtg
attgcaaatgcttctccagataccgtagatgaagttcttgcctttattccatcgctgaag
gctaagaaagaggtgctcaatcaacccctacaagatgcattggtggagctatccaaactg
aagaaatcggaatga

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