Camelina sativa (false flax): 104732214
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Entry
104732214 CDS
T05044
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104732214
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104732214
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104732214
NCBI-ProteinID:
XP_010450056
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Position
2:21944496..21946405
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AA seq
389 aa
AA seq
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MSIVLTIFLFFLKVSHAFAFAFVVPKPPIVRQLSTSVPSNSTAPCSANGNVIDECWRCDE
KWKDNRRNLADCAVGFGRDAIGGRAGEYYTVTDSGDDNPLNPSPGTLRYGATQDQPLWII
FDRDMVIKLKQDLQVASYKTIDGRGNNVQIGYGPCLTLYKVSNIIINNLYIHDCVPTKRS
LGGYSDGDGISIFESRDIWIDHCTLERCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGH
SDEFSGDQDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYREWKMYAIGGSANPTIFS
QGNVFIASDNQFTKEVTKRESVNGDDEWMEWNWKSEGDEMVNGAFFTPSGNEDSPTYAKM
SSIVARPASLLKAIHPSVGVLSCVTDQPC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgtattaacaattttcttgtttttcttaaaggtttctcatgcgtttgcgttt
gcgtttgtggttcctaaaccgccaattgtaaggcaactatccacatcagtgccgtcaaac
tcaacagctccttgctcagcaaatggaaatgtaatcgacgagtgctggagatgcgacgag
aagtggaaggacaaccgcagaaacctcgcggattgcgcggttggattcggacgcgatgca
ataggcggtagagctggcgagtactacacggtaactgattcaggagacgacaatcctcta
aacccatctccaggtacgctacggtacggtgcaacacaagatcaacctctatggattatt
tttgatcgagacatggtaattaaactaaaacaagatctccaagtagcatcgtataaaacc
attgacggtagaggaaacaacgtgcaaataggttacgggccgtgtttaactttatataaa
gttagtaatataattataaacaatctttatatacacgattgtgtacctactaaacggtcg
ttgggaggatactcggatggagatgggatctcgatattcgagtctcgggatatttggatt
gatcattgtacgttagagagatgttacgatgggcttattgatgcggtgaatggatccacg
gatataacgatttcgaatagttacatgttgaatcataatgaagtcatgcttttgggtcat
agtgatgagttttcgggtgatcaggatatgcgagttacgatcgcctttaactattttggt
gaaggacttgtccagagaatgccgaggtgcaggcatggatattttcacatagtgaataac
atttatagggagtggaagatgtatgctattggtggaagtgctaatccaaccatctttagc
caaggaaatgttttcatagcttcagataatcagttcaccaaggaggttacaaagcgagag
agtgtaaatggagacgatgaatggatggaatggaattggaaatcagaaggagatgaaatg
gttaacggcgctttctttacaccgtcagggaacgaggattctccaacctatgcgaaaatg
tcgagtatagtagctcgaccagcttcacttctcaaggccatacatccatcagtaggtgtt
cttagttgcgtaactgaccaaccttgttaa
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