Camelina sativa (false flax): 104732336
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Entry
104732336 CDS
T05044
Name
(RefSeq) probable pectate lyase 15 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104732336
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104732336
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF2448
DUF6556
NosD
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104732336
NCBI-ProteinID:
XP_010450167
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Position
12:complement(20510304..20514620)
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AA seq
465 aa
AA seq
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MASSSQKVISVCFAVFVVLALTVTILRYNSRKLKTEELQSLSSSTMAAIRKLKTEEVQSS
NSSTMAATRVGGEEQQQHAVAVDPEKGADEVAKLVQMSEQNRTARRKLGFFSCGTGNPID
DCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPTDEDVVNPKPGTLRHAVIQ
EEPLWIVFKRDMVIELKQELIMNSFKTIDGRGANVHIANGACITIQFITNVIIHGLHIHD
CKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAIT
VSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGA
YFRSSGEEASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttctcagaaagtgatcagtgtgtgcttcgccgtgttcgtcgtcttggct
ctaacggtgacgattctccggtacaattctaggaagctgaaaacagaggagttacagagc
ttaagcagctcaacaatggcggcgataagaaagctgaaaacagaggaggttcagagctca
aacagctcaacaatggcggcgacaagggttggaggtgaagaacaacaacaacacgcggtt
gctgttgatccagagaagggtgctgatgaagtcgctaagcttgttcagatgagtgaacag
aacaggacagcaaggaggaagctaggattcttctcctgtggaactggtaatccaattgat
gactgctggcgttgtgaccctaactggcacaagaaccgtaaacgcctcgcggattgtggg
atcggttttggaaggaacgcaattggtggtcgtgatggacgcttctacgttgttactgac
cccactgatgaagacgttgttaaccccaaaccgggaactctacgccatgctgtcatccag
gaggagcctctttggatcgtgttcaagagggatatggtgatagagctgaaacaggagctg
atcatgaacagtttcaagaccattgatggccgtggtgccaacgttcatatagccaatggt
gcttgcatcaccatccagtttatcaccaatgtcatcattcatggtcttcacattcatgat
tgcaagcctactggaaatgcaatggttagaagctccccatctcactttggttggaggaca
atggctgatggtgatgcagtctccatttttggatcatctcatatctggattgatcataac
tctctctctcactgtgctgatggccttgttgatgctgtcatggggtctactgctatcact
gtttccaataaccactttacccaccacaatgaggtgatgttgcttggtcacagtgactcg
tacacaaaagacaagctgatgcaagtgaccattgcttacaaccatttcggtgaaggactg
gttcagagaatgccaaggtgcaggcatgggtatttccatgtggttaacaacgactacact
cactgggagatgtacgccatcggtgggagtgcagaaccaaccatcaacagtcaaggaaac
agatatgctgctcccatggaccgcttcgccaaggaggtgacgaaaagagtggagacagat
gcaagtgagtggaagaagtggaattggaggtcggaaggagaccttctactgaatggagca
tacttcaggtcatcaggagaagaagcgtctgctagctatggacgagcctcaagcttagca
gctaaaccatcatctatggtcgacactattacctctactgcaggagcactaggttgccgt
aagggcagaccttgctag
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