KEGG   Camelina sativa (false flax): 104732559
Entry
104732559         CDS       T05044                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104732559
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104732559
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     104732559
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 104732559
NCBI-ProteinID: XP_010450427
LinkDB
Position
12:complement(24151829..24158550)
AA seq 872 aa
MSDGNMDVDDSPLSWKVKSLEALVDGSFSKSLSKLSSSSRLIPASRDFHFYYNFDEFKRP
IDEIAGTSQSALETIGDSEQVWEKSMKFPGDVDEVEAEDWLCNVNDEFIERFDVSVDEFK
RIRKKEEEIGRPVAYDGDDGFQMVYGKKKKPVGNVITGSAAKNTNGGGSMIDVKLAERER
NSSGKAKVPFHVPTIKKPQEEYNILVNNANQPFEHVWLERSEDDQRVMHPLEKLSVIDFV
DKDVNEMEPVKPLSLEETPFKFVQDVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCL
MQISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLF
DTGQASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPIPEEMIRYAREDTHYLLYI
YDGMRLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFKA
AQLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLDIAKEMPLSVGKLRRMLKTKHPYIER
NVDSVVSVIRQSVQNYAAFESAALSLKDASPGTVMDKNIEPIIEKKDVYTGDVASPSLKD
NSLQVESTRGLNTVAASTSEGRDLGTGLFGSAKVSAAVRISKKPSSGLGALLGSAASKKK
FRTDEKVKEDVKLEQIRSSVNLSFPSFTEKLPESRSATGTSKLHGKPEEVSTTMPASVPK
EDGVTKLKDDSEEASEIVGTSGRVSVSEVSSSETGDIILLENDDGDAKKVETEDEPMSLS
ELSTNFQKCFNSMKKSNKAQKQTEFINIEPFDYEAARKELKFGEGQKGRQGKKEAGAGQK
KKGSGPEQSEFGQGKRRQAFPASGNRSATFKS
NT seq 2619 nt   +upstreamnt  +downstreamnt
atgagcgacggtaacatggacgtcgacgattcaccgctttcttggaaggtaaagtccctg
gaagcattagtcgatggttctttctcgaagtctctctcgaaactctcatcgtcttcccgt
ttgattccggcgagtagagatttccatttttactacaatttcgatgagttcaaacgccca
atcgatgagatagctggaacctcgcagtcggctctcgagacgatcggtgattccgagcag
gtttgggagaaatcgatgaagttccctggcgatgttgatgaagttgaagccgaggattgg
ctttgtaacgtgaatgatgaatttatcgagagatttgatgtttcggttgatgagtttaag
aggattaggaagaaagaagaggaaattggtcggcctgtggcttacgatggggatgatggg
tttcagatggtttatgggaagaagaagaagccggttggtaatgtgattactggctcggcg
gctaagaatactaacggtggtggttcaatgattgatgttaagttggctgagagggagagg
aattcatctggcaaagctaaagttcctttccatgtaccaaccataaagaagcctcaagag
gagtataatatcttggtgaacaacgctaatcaaccgtttgagcatgtttggttggagcgg
agcgaagacgatcagcgggttatgcatcccctggagaaactttcagtgattgacttcgtt
gacaaagatgtaaacgagatggaacctgttaagcccctttcattggaagagactccattc
aagtttgttcaagatgtgaaagatctgaaagaattagttgctaaattgcgtagtgttgaa
gagtttgcggttgatctggagcataatcagtatcgatcttttcaaggattgacatgcttg
atgcaaatttccaccagaacagaggattacatagttgatacatttaagcttcgtattcac
attggtccttacctaagggagatattcaaagaccctaaaaagaaaaaggtaatgcatgga
gcagatcgagatattatctggcttcaacgggacttcggcatatatgtctgcaatctcttt
gacacaggacaggcctcaagggtgctaaatttggagagaaatagcctggagtttcttttg
caacatttttgtggagttactgcaaataaagaataccaaaatgcagactggagaatacga
cccattccagaggaaatgataagatatgcaagagaagatacccactaccttttgtacata
tatgatggaatgagactagaactgcaaagaatggcaaaggatgacgcgcatactgattct
cctctgcttgaggtctacaaacggagttatgatgtgtgcacacaactatatgagaaagag
ctattgaccgagaattcatatcttcatgtctatgggcttcaagcagccggcttcaaagca
gctcaacttgccattgttgcggggctctgtgaatggagggatttcattgcacgtgcagag
gacgagagcactggttatgtgttaccaaacaaagttctccttgatatagccaaggagatg
cctcttagtgttggaaaattgcgtcggatgttgaaaacaaagcatccttatatcgagcgg
aatgttgattcagtggtcagtgtcatcaggcagtcggtgcaaaattatgctgcatttgag
tctgctgctctatctttaaaagatgcgtctcctggaactgtaatggataagaatattgaa
cctattattgagaagaaagacgtttacacaggagatgtagcttctccaagtttgaaggat
aattctttgcaagttgaaagtaccagaggcctaaatacggttgcagcaagtactagtgaa
gggagagatttaggcaccggcttgtttggttctgctaaggtttctgcggctgttcggatc
tctaagaaaccaagcagtggtttaggagcattgctgggaagtgcagcatcgaagaagaaa
tttcgaactgatgagaaggtgaaggaagatgtgaagctcgaacagataagatcatctgta
aacctgtcattcccttcgtttacagaaaaacttcccgagtcaaggtcagctactggaaca
tcgaagcttcatgggaagcctgaagaggtgtccactactatgccagcctctgttcccaag
gaagatggtgtgacaaagttgaaagatgattcagaagaagcctcagaaattgttggtact
tcgggtagagtttcagtgtctgaagtatctagttccgagactggtgatattatactatta
gaaaatgatgatggtgatgcgaaaaaagttgagactgaagatgaaccaatgtctctctcg
gagttgtccacaaactttcagaagtgctttaactccatgaaaaagagcaacaaggcccaa
aagcagaccgagtttataaacatagagccgtttgattatgaagcagcaaggaaagagttg
aaatttggggaagggcaaaagggcagacaaggaaagaaagaagctggagcaggtcagaaa
aagaaggggtctggtccggagcagtcagagtttggtcaaggaaaacgtcgtcaagccttt
ccggcatccgggaaccgaagtgcgacctttaaaagttag

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