Camelina sativa (false flax): 104732860
Help
Entry
104732860 CDS
T05044
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104732860
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104732860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104732860
NCBI-ProteinID:
XP_019089236
LinkDB
All DBs
Position
12:29234449..29235979
Genome browser
AA seq
235 aa
AA seq
DB search
MTNSVMFFTFLLSLTLFHTFQFAHSRSTLYNENKIFNVLDYGAIGDGFSDDSKAFKDAWE
DTCNYIGSQSTMEIPEGYTFLLQPIEFHGPCKSKKIILSISGYVIAPGSPDEWECKKNHC
HQWIEFAHINGLHIDGRGTLDGQGTKWWSLNCKKYKKACLKRPRGVVISHSSNVHISNIM
VKDSPNFQMSLEDSKWVSVKQLTITADGDSPNTDGIHIQRSQNVIVHNSNIRTGD
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattccgtaatgttctttacatttcttctttctttaactctcttccacactttt
caatttgctcattctcgttctactctctataatgagaataaaatttttaatgttcttgac
tatggagcaattggagatggattttctgacgattcaaaggcattcaaggatgcatgggaa
gacacatgcaattacattggatcccaatcaactatggaaattcctgaaggatacacattt
cttctccaaccaattgagtttcatggcccttgtaaatccaagaaaatcattttatcgatc
agtggatacgtaattgctcccggatctcctgatgaatgggaatgcaagaaaaatcattgc
catcaatggatcgaatttgctcatataaatggacttcatatcgatggtcgtggtactctt
gatggtcaaggaacaaaatggtggtctctaaattgcaaaaaatataaaaaagcatgtctc
aagagaccaaggggggtggttatatcacattcgagtaatgtgcatataagcaacattatg
gtgaaggacagtccaaattttcaaatgtcgttggaagattcgaaatgggttagtgttaag
caactaaccataaccgctgatggtgatagccctaacactgatggcattcacattcaacgt
tctcaaaatgttatcgtacacaatagtaatatccgtacaggtgattga
DBGET
integrated database retrieval system
