Camelina sativa (false flax): 104732949
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Entry
104732949 CDS
T05044
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104732949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104732949
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104732949
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104732949
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
CHASE5
Motif
Other DBs
NCBI-GeneID:
104732949
NCBI-ProteinID:
XP_010450856
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Position
12:complement(30783290..30784959)
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AA seq
191 aa
AA seq
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MTTELVTPGDVIGKATEFKAGKGAYVNDTTIYASLTGTRRIVSPLPESLDQRAVVEVTGH
KAHGPIPEPGSVVIARVTKVMARMAAVDILCVGPKAVRENFAGVIRQQDVRATEIDKVDL
HQSFHAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWTEMQCPLSGQ
TEQRKVAKVGS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggagctagtaacgccgggagatgtaattgggaaagcgactgagtttaaagcc
ggaaaaggagcttacgtcaacgacacaaccatctacgcttccctcacaggaactcgtcgg
attgtttctcctcttcccgaatcacttgaccagagagctgttgtggaagttacgggtcac
aaggcacatggtcctataccagagcctggttctgttgtcatagcaagagtgactaaagtt
atggctcggatggctgctgttgatatcttatgtgttggtccaaaggccgttcgtgaaaat
tttgctggcgtgatcaggcaacaagatgttagagcaacagagattgacaaagttgacttg
catcagtctttccatgctggtgacattgttagagctatggttctgtctcttggtgatgca
cgggcatactatttgtcgactgctaagaatgaacttggtgtggtctcagcagagagtgct
gcaggcgaaacaatggttcctataagttggacggagatgcagtgccccttgtcaggccaa
accgagcaaaggaaagttgccaaagtgggtagttga
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