Camelina sativa (false flax): 104733128
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Entry
104733128 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104733128
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104733128
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104733128
NCBI-ProteinID:
XP_010451040
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Position
12:complement(2344299..2346509)
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AA seq
405 aa
AA seq
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MDFHHRHLSMETTLRVWIWINFLCFVLVNGQNYNVLNYGAKGDGQTDDSEVFEQAWNDTC
GGDGDIKTLLIPLDKTFLLQPTVFQGPCKSSSIKVQLDGVIIAPSDKGASSNPTPKTWIK
FSYVSGLMIVGSGTINGRGLTFWELNLKASQRPTALHISKCDNFRINGLTSIDSAKNHIS
INKYNTVAISNINLFAPETSPNTDGIDISESTNINIFDSTIQTGDDCIAINSGSSNINIT
GINCGPGHGISVGSLGAGGAEATVSNVQVTHCTFNQTTNGARIKTWLGGQGYARNISFTD
ITLINTKNPIIIDQQYIDKGRLVSEESAVAISNVKYIDFHGTTSNKNAITIKCSETTHCI
DVVMDGIDITMVDGGKPKVNCQYVDGESSDNDLMRNCFKNNTSTN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggattttcatcatcgccatttatcgatggaaaccacattacgtgtttggatctggata
aatttcttatgttttgtcctcgtaaacggtcaaaattacaacgtacttaattatggtgct
aaaggagatggtcaaactgatgattcagaggtttttgagcaagcatggaatgatacatgt
ggtggagacggagacatcaaaacacttcttattcctttagacaaaacatttttacttcag
cctacggtgttccaaggtccatgtaaatctagctctataaaagttcagttggatggagtt
atcatagcacctagcgataaaggagcctcgtccaatcccacccctaaaacgtggatcaaa
ttttcatatgtgtctggtctaatgatcgttggttctggaacgattaatggtcgtggttta
actttttgggagctaaatttgaaagcttctcaacgacctaccgcattacatattagcaaa
tgtgataactttaggataaatgggctaacctcgattgatagtgcaaaaaaccatatatca
atcaacaaatacaacactgttgcaatatcaaacataaatctttttgcacctgagacaagt
cccaatacagatggaattgatataagtgaatcaactaatatcaacatatttgactctaca
attcaaacgggggatgattgtatagcaatcaacagtggaagttctaatatcaacatcaca
ggaattaattgtggaccaggtcatggaataagtgtaggaagtctaggagccggtggagca
gaggctacagttagtaatgtacaagtgactcattgcactttcaatcagacgacgaatgga
gctagaatcaaaacatggctgggtggacaaggatatgcaagaaacataagttttaccgac
atcacactcattaacacaaaaaatccaattataattgaccaacaatatatagataaagga
cgtcttgtttccgaggaatcagcagtggcgattagcaatgtaaagtatatcgattttcac
gggacaacatcgaataaaaatgctataacgattaagtgtagtgaaaccacacattgcata
gacgtcgttatggatggaattgatattaccatggtggatggaggaaaacctaaagttaat
tgccaatatgttgatggggagtctagtgataatgatctaatgcgtaactgctttaaaaat
aacactagtactaattag
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