Camelina sativa (false flax): 104733177
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Entry
104733177 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104733177
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104733177
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
104733177
NCBI-ProteinID:
XP_019089017
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Position
12:complement(4149634..4151851)
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AA seq
447 aa
AA seq
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MVPLIPMGFDVLFALLLITSYHLQHGDSRVILSIKDFLSDSDSKIVDHSQAFQAAWRALC
GGRGRGQGSSLVIHARETYTIQPQRFEGPCASPHIHIQIDGTIEAPKMVKDWGSKKSECW
LCFERVTGLVLNGSGVLNSNGQSWWSSVALSSRREAVRFLGCQNILYNGLTQINSPRNHI
SVTGCTNATLLNLHLIAPSNSPNTNGIDISVSHNIQIRSSSIKTGDDCISIQGGSYDINI
TYVTCGPGHGISIGSLGKGGANDIVQNVNVRHCTFTRTENGARIKTWPGGRGFVKNILYE
DITMINVRSPIIIDQHYCNGVRPCPQPAGATALKVSGVTYRYFKGTSLPDVTAVKLDCDQ
RTVCDSIVMEHINITSSSQRRPLTSYCRFAHLIRRFVSIGINCGFHVNPKTPSVAPYVIP
QTPYYELPAPTAQPPSPASYVIVADLG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggttccactgatccccatgggatttgatgtactgttcgcattgcttctaatcacatcg
taccatttgcaacatggagatagtcgggttattctatccattaaagattttttatctgat
tctgattctaaaattgttgatcattctcaggcatttcaagcagcgtggagagcgttatgt
ggaggtagagggagaggtcagggatcctctttagtaatacatgctagggaaacatatacc
atacaaccacaacggtttgaaggtccttgcgcatctcctcatattcatattcagattgat
ggaacgattgaagcgccaaaaatggtaaaagactggggaagcaaaaaaagtgagtgttgg
ttatgtttcgagagggtgacaggtctcgttctcaatggatctggtgttctcaattccaat
ggacaaagctggtggtcttctgttgccttatcctcccgacgagaggcagtgagatttctt
gggtgccaaaacattttatataatggattaactcaaattaatagtccaaggaatcacata
tcagttactggttgcaccaacgcaactttattaaatcttcatttgatcgcaccctcaaac
agtccaaatactaatggcattgatatctctgtttcacataatatccaaattcgcagttca
tcaatcaaaactggtgatgattgcatttcaattcaaggtggttcgtatgatatcaacata
acttatgtgacatgtggtcctggtcatggcataagtatcggaagtctagggaaaggaggg
gcaaatgatatagtacaaaatgtgaatgtcagacattgcaccttcactcgaactgaaaat
ggcgcaagaatcaagacttggcctggaggacgtgggtttgtcaaaaatattttgtatgaa
gatattacaatgataaatgtcagatcccctatcatcatcgaccaacattattgtaacggt
gttcgcccgtgtccacaaccagcaggggcaactgctttgaaagtgagtggtgtgacatat
agatactttaaagggacaagtttacccgatgttactgcagtaaaattagattgtgaccaa
agaacagtttgtgatagcatcgtcatggagcacatcaatatcacttcctcatctcagaga
aggcctctcacctcgtactgcagatttgcgcacctaattagacgctttgtttccattggc
atcaattgtggttttcatgtcaatcccaaaactccatcagttgcaccgtatgttatacct
caaacaccgtattatgaacttccagcacccaccgctcaacctccatcacccgcatcgtat
gttatagtggcggatctaggataa
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