Camelina sativa (false flax): 104733178
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Entry
104733178 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104733178
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104733178
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
104733178
NCBI-ProteinID:
XP_019089018
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Position
12:complement(4152693..4154995)
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AA seq
338 aa
AA seq
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MVKKWKNINHESKSWLYFTNVIGLVLNGSGVLHPHGEAWWSFVEHSHRPHTVGLNGSCNI
IYNGLTQMNSQKNHISIINCTNATISNLHLIAPKDSPNTDGIDIVHSNNIQIFYSSIQTC
GDCVAINGGSYDINITHVACGPGQGISIGSLGRGGENDTDENVKVRHCSFNATHNGQESR
LGLEDMSSPKNILYENITLINAKYPIIIDQHYCNCYHYCTEEATVVKVRNVTFKYFXGTC
ADDITIKLDCDKVVGCDDIVMEHINITSSSTKKPLTTYCQFADVISYIVSVDIKCGFDEE
TLAPCKPPTLAKPPALYAKPLPSNAQPPMLSPFPYIPY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaagtggaaaaacattaaccacgaaagtaaaagttggttatatttcacaaac
gtaataggtctcgttcttaatgggtctggtgtcctccatccccatggtgaagcttggtgg
tcctttgtagagcactcccaccgaccacatacagtgggattaaatggaagctgtaacatt
atatataatggactaactcaaatgaacagtcaaaagaatcacatttcaataataaattgc
actaatgcaactatatcaaatcttcatctgatcgcacctaaagatagtccaaacactgat
ggcatcgacatcgttcattcaaacaatatccagattttctactcatctatccaaacatgt
ggtgattgtgttgccattaatggtggttcgtatgatatcaacataacgcatgtggcatgt
ggtccaggtcagggcatcagtattggaagtttggggagaggtggggaaaatgataccgac
gagaatgtgaaagtaagacattgtagcttcaatgcaactcataacgggcaagaatccaga
cttgggctggaggacatgagttcgccaaaaaatatcctatacgagaatataacgttaata
aatgccaaataccctatcatcattgatcaacattactgtaattgttatcactattgtaca
gaagaggcgactgttgtaaaagtgcgcaatgtgacatttaaatacttctaagggacatgt
gctgatgatattaccataaaactagattgtgacaaagtagtgggttgtgatgatattgtg
atggaacacatcaacatcacttcttcatctacgaagaaacccctaaccacgtattgtcaa
tttgctgatgtgattagttacattgtttccgttgatattaaatgtggttttgatgaagaa
actttggcaccatgtaaacctccaactctggctaaacctcctgcactctatgctaagcct
ctgccatcgaatgctcaacctccaatgctatctccttttccatatataccttattaa
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