Camelina sativa (false flax): 104733346
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Entry
104733346 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit beta 3, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104733346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104733346
03110 Chaperones and folding catalysts [BR:
csat03110
]
104733346
03029 Mitochondrial biogenesis [BR:
csat03029
]
104733346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104733346
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104733346
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104733346
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104733346
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104733346
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104733346
Exosomal proteins of other body fluids (saliva and urine)
104733346
Exosomal proteins of breast cancer cells
104733346
Exosomal proteins of colorectal cancer cells
104733346
Exosomal proteins of bladder cancer cells
104733346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
104733346
NCBI-ProteinID:
XP_010451233
UniProt:
A0ABM0V5T2
LinkDB
All DBs
Position
2:22907839..22911325
Genome browser
AA seq
598 aa
AA seq
DB search
MASTFSATSSMGSSLLAPPSNRLSSFVSISSSSFGKSQSIAQRKARFPKIYAAKELHFNK
DGTAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVEN
IGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALV
AELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYV
VEGMQFDRGYISPYFVTDSEKMSAEYENCKLFIVDKKITHVRDIMTILEDAIKGGYPLLI
IAEDIEQEPLATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIATLTGATVIREEVGLQL
EKVGPEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQDYEKEKLNERI
AKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAI
KETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSNDNPKHGYNAATGKYE
DLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVDIKEPESAAPAGNPMGNSGYGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacctttagcgcaacgtcttcaatgggatcatctttgttagctcctccttcg
aatagattgtcatcttttgtttcgatctcttcaagttcttttgggaagagtcagagtatt
gctcagaggaaagcaaggtttcccaaaatctatgcggctaaggaattacatttcaataag
gacgggactgcgattaggaagcttcaagctggtgtgaataaacttgcggatttagttggt
gttactctaggtcctaaaggcaggaatgttgttttagagagcaagtatggttctcctaga
atcgtaaatgacggtgtaacagttgctagagaggttgagcttgaggatcctgttgagaac
attggtgctaagctagtgagacaagctgcttccaagactaatgacttagctggtgatgga
acaacgacttctgttgttcttgcgcaaggtcttattgctgaaggtgtaaaggtggtggct
gctggtgcaaatccggttttgattaccagaggaatagagaaaactaccaaggctcttgtc
gccgagttgaagaaaatgtctaaggaggtcgaagacagtgaacttgcagatgtggcagcg
gttagtgcaggaaacaattacgaagtaggcaatatgattgcagaagcaatggcaaaagtt
ggtcgtaaaggtgttgtcacactcgaggaaggaaaaagcgctgagaatagcctttatgta
gttgaaggaatgcaatttgatcgtggctatatctctccttactttgtcactgacagtgag
aaaatgtctgcagaatacgagaactgcaagttgtttattgttgacaagaagataacacat
gttagagacattatgacgattctggaagatgctattaaaggtggatacccgcttttgatc
attgctgaagatattgagcaagagccattagcgactcttgttgttaacaagcttcgtggt
actattaaagttgctgctttgaaagctcctggatttggggagaggaaaagccagtacctc
gatgacattgctactcttacaggagctactgtgattagggaagaagttggacttcagttg
gaaaaagttggaccagaagttttgggtaatgccggtaaagtggttctcacaaaagacact
acaacgatcgttggtgatggaagtactgaagaagttgtgaagaagagagttgaacagatc
aagaatcttatcgaggctgctgaacaagactatgagaaggaaaagcttaatgagagaatc
gctaaattatcaggcggtgttgctgtaattcaggttggagcacaaactgagacagagctt
aaggagaagaaattgagagttgaagatgctcttaatgctacaaaggcggctgtggaagaa
ggtattgttgttggaggtggttgtactctactaagacttgcatcgaaagtggatgccatt
aaagagactctagcaaacgatgaagaaaaggtcggagctgacattgttaagaaagcattg
agctacccactgaagttaatcgccaagaacgctggtgtcaatggtagtgtcgtcagtgag
aaggttctctctaatgacaaccctaaacacggttacaacgctgcaactggcaaatacgaa
gatctaatggctgcaggaatcattgatccaaccaaagttgtgagatgttgcttagagcat
gcttcatctgtggcgaagacattcttgatgtctgattgtgttgttgtggacatcaaagag
cctgaatcagcagctcctgctggaaaccctatgggcaattcaggttacggcttctaa
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