Camelina sativa (false flax): 104733368
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Entry
104733368 CDS
T05044
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104733368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104733368
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104733368
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_Gbeta
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
NBCH_WD40
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
104733368
NCBI-ProteinID:
XP_010451252
UniProt:
A0ABM0V5U4
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Position
12:complement(10498219..10501287)
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AA seq
418 aa
AA seq
DB search
MMVDEDPSASNVITNTNSSSSSSSSSPSMNNTTPVVSLERRINRLINANQSQSPSRSIYS
DRFIPSRSGSNFALFDLSPSPSKDGKEDGAGSYATLLRAAMFGPETPEKRDITGFSSSRN
IFRFKTETKTHRSFNSFSPFGVDDPPGGVSHSPVKAPRKVPRSPYKVLDAPALQDDFYLN
LVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGADDSVCSVGWALRGTHLAVGTSTGK
VQIWDASRCKRTRTMEGHRLRVGALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHK
SEVCGLKWSYDNKELASGGNDNRVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIAT
LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGSSFFGRTTIR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatggttgatgaagatcctagcgcaagcaatgtgataacgaatacgaattcttcttca
tcttcatcttcatcatcgccgtcgatgaataatactacaccggtggtttcacttgagaga
cggatcaaccggttgatcaatgcgaaccaatctcaatcaccgtcgaggtctatatactct
gatagattcatacccagtagatccggatccaattttgctctcttcgatctgtctccttcg
ccgagtaaagacggtaaagaagacggagctggctcttacgccactctgttgcgtgcggct
atgtttggtccagagacgccggagaagagggatattactgggttctcttcttctaggaat
atttttaggtttaagacggagactaagactcatcgttcttttaattcgttttctcctttt
ggtgttgatgatcctcctggtggtgtttctcattctccggtcaaagctcccaggaaagtc
ccgcgatcgccttataaggtactggatgcaccggctttgcaagatgatttttacttgaat
cttgtggattggtctgctcaaaatgttcttgcagtgggattaggaaactgcgtttattta
tggaatgcttgtagcagcaaggtaacaaagttatgtgatctcggggcagatgatagtgtt
tgctcagttggttgggcgttacgtggaactcatctggctgttggaactagtaccgggaaa
gttcagatatgggatgcgtcgcgctgcaagagaacaagaacaatggaaggtcatcgtcta
agagttggcgctctggcatggggttcatcggttctgtcatctggtagcagagacaagagt
attcttcagagagacataaggtgtcaagaagatcatgtcagtaaactggcaggtcacaag
tctgaggtatgtggactcaagtggtcttatgacaacaaagagttagcatctggtggaaac
gacaatcgggtatgcaatctggcttggtctaagaatgtgaacgagctggttagcacgcac
gggtactcccaaaaccagatcattgtttggaaatacccaactatgtccaaaattgcaact
ctcaccggtcacacataccgtgtcctgtaccttgcggtttcacccgatggacagacgata
gtaacaggagcaggagatgaaacattaaggttctggaatgtgtttccttcacccaaatct
cagaacacggatagtgaaatcgggtcgtctttctttggtagaacaacaattcggtga
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