Camelina sativa (false flax): 104734163 Help Entry 104734163         CDS       T05044                                  Name (RefSeq) symplekin-like isoform X1   KO K06100   symplekin Organism csat  Camelina sativa (false flax) Pathway csat03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:csat00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     104734163  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csat03021]     104734163    03019 Messenger RNA biogenesis [BR:csat03019]     104734163 Transcription machinery [BR:csat03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104734163 Messenger RNA biogenesis [BR:csat03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      104734163     U7-dependent histone pre-mRNA processing factors      104734163 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT HEAT_2 HEAT_EZ TM_HPP Motif Other DBs NCBI-GeneID:  104734163 NCBI-ProteinID:  XP_010451991 UniProt:  A0ABM0V757 LinkDB All DBs Position 13:222693..231447 Genome browser AA seq 1442 aa AA seqDB search MVGIMASYSRERLEGLASSAKSATELPPKLHRLRNLRRDLRKDESVFPIELLPHLFDLLS DQFGAVRKFVAEILGEIGLKYVELLPEIVPLLIKSLEDETPAVARQVIACGADLFRSTLE RVAVQGLHSSELNDFLESSWTWMIKVKDEICSVAFKQGNSGVKLCAMKFVEALILLYTPH EGSEADFNITILRGGHPVLNIGDLSIEASQKLGLLLDQLRHPAAKSLNSSTIIVLINSLS SVAKKRPAYCGRILPVLLSLDPLSFLKGVHAAAASLALKTVFLSYLKCTHPAAAPWKDRL IGALKEIEGGGRAGKAKDLFYKTNGSIQDKDSAEDTKVSVEANNLCASSDVAESNFGRKR SGSEYNIDLNGDALNGKRARITPSVSEESTDGLNGNDGGSLPRVASTSTGPSNSRGVSDT EPVQQLVNMFGILVAQGEKAIGSLEVLIKNICPDLLTDVVMANMHNIPPNSSSYADSSNE LVMNMCIVDSDAQIKYPPSFVADVLSLSTAFPPIAALINPGIPKTENEDEEVFSVHVDQM MFSAEDAVLATGLLPSSDASFPENEEDSTVFPPDVHYKGNTESGIPGLDSSAQLDLSGSR VTSVLNSMNVEAATKNQNASGKLLVDVIPSMSVDKSDEFSPKAAATGSTSLVLSTATSVA SAPQFVLPKISAPVVDLSDEEKDSLQKLVFLRIVEAYKQISMSGGSQLRFSLLAHLGVEF PSELDPWKILQEHVLSDYLNHEGHELTVRVLYRLYGEAEAEQDFFSSTTAASAYESFLLT VAEALRDSFPPSDKSLSKLLGDSPHLPKSVLKLLESFCCPGSGEQVEKDLQNGDRVTQGL STVWSLILMRPGIRSDCLKIALQSAVHHLEEIRMKAIRLVANKLYSLSFITRQIEEFAKD RLFSVVSCISSESGDAETRIDDYNKKDLDLKSSPNKPQPVISGIDTPSEGTSLTSITEAQ RCLSLYFALCTKKHSLFVHVFSIYKNALDPVKQAIHLQIPILVRTMGSSSELLKIIADPP SGSENLLMQVLQTLTEGPTPSSELILTIRKLFDTRIKDVEILFPILPFLPRDDVLRIFPH MVNLPMEKFQVALSRVLQGSSQSGPVLSPSEILIAIHSIDPARDGIPLKQVTDACNTCFA QRQTFTQQVLAGVLNQLVQQIPLPMLFMRTVLQAIGAFPALSDFILEILSRLVSKQIWKY PKLWVGFLKCAQTTQPQSYKVLLQLPPPQLGNALTKIPALRAPLTAHASQPEIQSSLPRS TLAVLGLVPDSQGTQTSHVQANETQTSQEQQQQQASESQQTSQSEQVSVPLSPSKTNHQE PSQVIGGQSQSSPGGTGLSEMSQSQNSPIDTGRCEMSQSQSSPVGTGQSEMGQSPQVSES SAPAGPAPTSHTRTSDSRASSQTHRDDDEKIDDTATSEKEVTKSEKSEESSSEAEEEEEE EE NT seq 4329 nt NT seq  +upstreamnt  +downstreamnt atggttggaatcatggcttcgtattcaagagaaaggcttgaaggtctcgcgagttccgcc aaatcagccacggaattgcctccgaagttgcatcgcttacgcaatttgcgccgggatttg cgaaaggacgaatccgtttttcccatcgagttgcttcctcatcttttcgatcttctctcc gatcagttcggtgctgttcgcaagtttgtcgccgagatacttggtgaaattggattgaaa tatgttgaattattacccgaaatagttccccttttgattaagtctctcgaagacgagaca ccagctgtggcgaggcaggtcattgcttgtggagctgatttattccgttccaccctcgaa agagtggcagttcagggtttgcattctagtgagttgaatgattttcttgaatcttcgtgg acatggatgattaaggttaaggatgaaatatgctcagtcgctttcaagcaaggaaacagt ggtgttaaattatgcgccatgaaatttgtggaagcgcttattcttttgtatacacctcat gaaggaagtgaagcagattttaatataactatccttcgtggggggcatcctgttttgaat atcggagacttgtcgattgaggccagccagaaattgggtttactgcttgatcagcttagg caccctgcagcaaaatctctaaatagttcgacgattattgttctcattaatagtctttca tcagttgcaaagaaacgtcctgcatattgtggacgtattctacctgttctacttagcttg gatcccctaagctttctcaaaggagtgcatgctgcagcagcaagtcttgccttgaagact gtatttctctcctacttgaaatgtacacatcccgctgctgcaccgtggaaggatcggttg atcggtgctcttaaagagatagaaggtggaggtcgggcaggcaaagctaaagatcttttt tacaagactaacggaagcattcaagacaaagacagtgcagaggataccaaggtatcagtg gaagcgaataacctatgtgctagttctgatgttgcggaaagtaactttggtaggaaaaga tctggatcagaatacaatattgatctaaatggagatgctttgaatggaaaacgtgcaaga ataacaccttctgtgtcagaagaatctactgacggattaaatggtaatgatggtggctct ctacctcgggttgcttctacctcaactggaccgagtaatagcagaggagtgagtgatact gaacctgttcagcaactagttaatatgtttggaatcttggttgctcagggtgaaaaagca attggatctttggaggttcttattaaaaatatttgtccggatctgcttactgatgttgtg atggctaatatgcataatattccaccaaatagttcttcttatgctgatagcagcaatgag ttggtgatgaatatgtgtatagttgatagtgatgcacaaatcaaatatcccccatcattt gtagcggatgtcctttcactgtcaactgcattcccaccaattgctgccctgataaatcct ggcataccgaaaacggaaaatgaagatgaagaagtcttttctgttcatgtggaccagatg atgttttcagctgaagatgcagttcttgcaactggcttattaccttcttctgatgcctcg tttccagaaaatgaagaggacagtactgtgtttccaccagacgtgcattataaagggaat acggaaagtggaatacctggattggattcttctgctcaacttgatttatcaggatcccgt gttacttctgtattgaattctatgaatgtggaggctgcaaccaagaatcaaaatgcgagt ggaaaacttcttgtcgatgtaattccttcaatgtctgtggataagtctgatgaatttagt ccaaaggcggctgccacaggttctaccagcttggtattgtcaactgcaacttcagttgct tctgcgcctcagtttgtcctgcctaagatatcagcacctgttgtcgacctttctgatgaa gagaaagacagtttgcagaagctggtttttttgcgcattgttgaagcatataaacaaatc tcaatgtctggtggttcacaactccgcttttctcttcttgctcacttgggagttgagttt ccttcagagttagacccttggaaaatactacaggagcatgttctgtcggattatttgaat catgagggacatgagctgaccgtgcgggttctttacagactatacggggaagcagaagca gaacaagatttcttctcgtcaactactgctgcgtctgcatatgaaagtttcttgctgact gtggccgaagcacttagagattcttttccaccgtctgacaaatccttaagtaaattgctt ggagattctccacatctgcccaaatcagttctgaagttgttggaatcattttgctgtcct ggaagtggtgaacaagttgaaaaggatttacagaatggagaccgtgttactcaaggtctc agtactgtttggagccttattttaatgagacctggaatccgaagtgattgcctgaagatt gcgttgcagagtgctgttcatcacttggaagagattcgcatgaaagcaattcgcctggtt gcaaacaagctctactctttatcattcattacacgacagattgaagaatttgcaaaggat aggctgttttccgtcgtaagttgcatttcttcagagagtggagatgctgaaacacggatt gatgattataataagaaggatcttgatctgaaaagttcaccaaataaaccacagcccgtt attagtggcattgatacgccttcggaaggaacatcattaacttcaattactgaagctcaa cgctgcctgtcactctattttgctctctgtacaaagaagcactccctttttgttcatgtg ttcagcatttacaagaatgcattagatcctgttaagcaggctattcatcttcaaatccca atactagttcgtactatgggctcatcctctgagcttcttaaaattatagctgacccacca agtgggagtgagaaccttctaatgcaggttctccaaaccctcactgaggggcccacgccg tcttcagaattgatacttactataagaaagttgtttgatacaagaataaaggatgtagaa attcttttcccaattttgccgttcctgccaagagacgatgttctgcgcatttttccacat atggtgaatcttcccatggagaaattccaagttgcactttctcgtgtgctgcagggatca tctcagtctggcccagtgctttctccatctgaaattttaattgctatccatagcattgac ccagcaagagatggaatacctcttaaacaggtcacagatgcatgcaatacctgttttgca cagaggcagacattcactcaacaggttttagccggcgttctgaatcaactggtccagcaa attccactgccaatgttattcatgcgtacagttttacaagctatcggtgcttttccagct ctgtcggacttcatcttggagatcctttctcgtcttgttagcaaacagatatggaaatat ccgaaactgtgggtggggtttttgaaatgtgcacagacaacacagcctcagtcatacaag gtcttactacagcttcctccacctcaactgggaaatgcattgactaaaatcccagcatta agagctccactaaccgcacatgccagccagccagagattcagtcttcacttccaaggtct acactggctgttcttggacttgtccctgattctcaaggaacacaaaccagccatgtgcaa gcgaatgagacacaaacgagtcaggaacagcagcagcagcaagcaagcgagtcacagcaa acgagccagtctgagcaagtttctgtaccattgagtccctccaaaacaaatcaccaggaa cccagtcaggtaattggcggtcagtctcaaagcagtcccggaggtacggggctgtctgaa atgagtcagtctcagaacagtcccatagatacgggccggtgtgaaatgagtcagtcacaa agcagtccagttgggactgggcagtctgaaatgggtcagagccctcaagtgtcggaatcg agtgctccagcaggaccagcaccaacgagtcatactcgaacatcagactctcgagcgtca agccagacacatcgtgatgatgatgaaaagatagacgacacagcaacctcggagaaggag gtgacaaaaagtgagaaatcagaggaatcttcttctgaagcagaagaagaagaagaagaa gaagagtaa

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