Camelina sativa (false flax): 104734227
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Entry
104734227 CDS
T05044
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104734227
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
104734227
Transfer RNA biogenesis [BR:
csat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
104734227
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
104734227
NCBI-ProteinID:
XP_010452057
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Position
13:510916..515567
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AA seq
806 aa
AA seq
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MMSVRAINGCSIIRAATSGGGPPVSLFRHRIQRLRASHLREFSKLGLDFPLIRVKRRFLG
NNGGGGATSCSSCIHSLVESVSEELESINRRKRSRLRVRASVKVKLTSYGEVLEDKLVNQ
ELEAGWLLEFKKDADRVLLAVSHRRDGKKNWMVFDQNGVTCSIKPQQITYIVPGVYNFDH
TGLTDFLQRAQENLDPQLIEFAWIELLEKNKPVTPEELAEMIYGRSDSLESYCAHFLLSQ
DEIYFSVLESKGSRSIYSPRPTEQVEELLRRQRVKEAEEKEFQEFIQLLKSAKKAPIHAK
PPKSSWLADDKLQDKIGSLEAYAIDAWASTDQRKLAGTILKSMGLQKTSVSALNLLVDIG
YFPVHVNLDLLKLNLPTHHSEAIIEAAEVLLSESSDVDAVRRIDLTHLKVYAIDVDEADE
LDDALSAMRLQDGRIKIWIHVADPARYVTPGSKVDREARRRGTSVFLPTATYPMFPEKLA
MEGMSLRQGENCNAVSVSVVLHSDGCIAEYSVDNSIIRPTYMLTYESASELLHLNLEEEA
ELRLLSEAAFIRSQWRSEQGAVDTTTLETRIKVVNPEDPEPLINLYVENQAERAMRLVFE
MMILCGEVIATFGSQHNIPLPYRGQPQSNIDVSAFAHLPEGPVRSSSLVKVMRAAEMNFR
CPVRHGVLGIPGYVQFTSPIRRYMDLTAHYQIKAFLRGGDNFPFSAGELEGIAASVNMQS
KAVRKLSNSGLRYWVIEFLRRQEKGKKYTALILRFVKDRIASLLLVEVGFQATAWVSEGK
QVGDEIQVRVEEAHPRDDLIIFKEII
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggtgagggcaatcaatggttgctccatcattcgcgcagccacttccggcggc
ggccctcccgtctccttatttcgccaccgtattcagcgccttagagcgtctcatctccgt
gaattctcaaaattagggttagattttccattaatccgcgtgaagaggcggtttctcggg
aataatggaggtggtggtgctacgagctgttcgtcttgcattcatagtctagtcgaaagc
gtttccgaagagctcgaatccatcaacaggcgtaagcgaagccgattaagagttcgtgcc
agtgttaaggtgaaattaacaagctatggagaggttctggaggataagctagtgaaccag
gaactagaggcgggctggcttctggagtttaagaaggacgcagacagggtattgttggca
gtttctcatagacgtgatggaaagaagaattggatggtctttgatcagaatggtgttact
tgttccatcaaaccccagcaaattacgtacatcgtcccgggtgtttataattttgaccat
acaggacttactgattttctccagagggctcaggagaatttggatccccaattgattgag
tttgcttggatcgagttacttgagaagaacaaacctgtgacgccagaagagttagcagag
atgatatatggtcgctcagattctcttgaaagctattgtgctcattttttgctgtcacaa
gacgagatatacttttctgtcttagagtcaaaaggttctcgatcaatatatagcccccgg
cctactgaacaggtggaagagcttttacgaaggcaacgcgtgaaggaggcagaagagaaa
gagtttcaggagtttattcaattgttgaagtctgccaagaaggcgcctattcacgccaag
ccccccaaatcttcatggctagctgatgataaattgcaagataagattggctcacttgaa
gcttatgctattgatgcatgggcaagcactgaccagcggaaattggctggaacgatctta
aaatccatggggttacagaaaacgtctgtctcggcactaaaccttctcgtagatattgga
tattttcctgtacatgtcaatcttgatctgcttaagctgaatcttccaacccaccactca
gaagctatcattgaagctgctgaagttcttctctcagaatcgtctgatgttgatgcggtt
aggaggattgatctcacacacttgaaggtttatgctattgatgttgatgaggctgatgag
cttgacgatgccctcagtgcaatgagattgcaggacggacggataaagatctggatacat
gttgcggatcctgctagatatgttacacctgggagtaaagtggacagagaggcaaggaga
aggggaacttctgtctttctgcctacggctacttatccaatgtttcctgagaaacttgcc
atggaaggaatgagtttaagacagggggaaaactgcaatgctgtctctgtgtccgttgtc
ctgcattctgatggctgtattgcagaatattcagtagataactctatcatcagaccgacc
tatatgttgacatatgaaagtgcttcggagctgcttcacttgaacctagaagaagaagct
gaactgagattgctgtctgaggcagctttcattcgctcccaatggcgcagtgaacagggt
gcagtggacacaactacattagaaactcgtatcaaagtggtgaatcctgaggatccagaa
cctttgataaatctctatgtagaaaatcaggcagaacgagcgatgagacttgtctttgaa
atgatgattctttgtggggaggttatagcaacgtttgggtctcagcataatattccattg
ccatatagaggacagccgcagtcaaatattgatgtatctgcatttgcgcatcttccagaa
ggacccgtacgttcgtcatccctcgtcaaagtaatgcgtgctgcagaaatgaattttaga
tgtcctgttcgacatggagtgcttggaattcctggttacgttcagttcacatctcccatt
cgtcgatacatggatcttactgcacactaccagatcaaggcttttcttcgaggaggtgac
aattttcctttctcggctggtgagttagaaggtatagcagcatccgtaaacatgcaaagc
aaagcagtgagaaaactctcaaacagcggtctccgctattgggtaatagagtttctcaga
agacaagaaaagggaaaaaagtacaccgcattgatcttgagatttgtcaaagaccggatt
gcatcccttttgttggttgaggtgggttttcaagctactgcgtgggtgtcagaaggaaaa
caagtgggagatgaaatccaagttcgagtagaagaagctcatccccgcgacgatcttatt
attttcaaagagattatctga
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