| Entry |
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| Name |
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e isoform X1
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| KO |
| K03283 | heat shock 70kDa protein 1/6/8 |
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| Organism |
csat Camelina sativa (false flax)
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| Pathway |
| csat04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104734259
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104734259
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104734259
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:csat01009]
104734259
09182 Protein families: genetic information processing
03041 Spliceosome [BR:csat03041]
104734259
03009 Ribosome biogenesis [BR:csat03009]
104734259
03110 Chaperones and folding catalysts [BR:csat03110]
104734259
04131 Membrane trafficking [BR:csat04131]
104734259
03051 Proteasome [BR:csat03051]
104734259
03029 Mitochondrial biogenesis [BR:csat03029]
104734259
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:csat04147]
104734259
Protein phosphatases and associated proteins [BR:csat01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104734259
Spliceosome [BR:csat03041]
Complex B
Other components
Prp19 complex
104734259
Complex C
Prp19-CDC5 complex
104734259
Ribosome biogenesis [BR:csat03009]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104734259
Chaperones and folding catalysts [BR:csat03110]
Heat shock proteins
HSP70 / DNAK
104734259
Membrane trafficking [BR:csat04131]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104734259
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104734259
Proteasome [BR:csat03051]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104734259
Mitochondrial biogenesis [BR:csat03029]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104734259
Exosome [BR:csat04147]
Exosomal proteins
Proteins found in most exosomes
104734259
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
13:complement(671114..675025)
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| AA seq |
651 aa
MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVNYKGEEKEFAA
EEISSMVLIKMREIAEAYLGVSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKSKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFED
KMKELESICNPIIAKMYQGAGGEAGGPGAAGMDDDAPPASGGAGPKIEEVD |
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| NT seq |
1956 nt +upstreamnt +downstreamnt
atgtcgggtaaaggtgaaggtccagcaatcggtatcgatctcggtactacttactcttgc
gtcggagtatggcaacacgaccgtgttgagatcattgctaatgatcaaggaaacagaacc
actccatcttacgtagctttcaccgactccgagaggttgatcggtgatgccgctaagaac
caggtcgccatgaaccctgttaacaccgtttttgatgccaagagattgatcggtcgtcgt
ttcagtgacagctctgtccagagtgacatgaaattgtggccattcaagatccaggccgga
cccgccgacaagccaatgatctacgtcaactacaagggtgaagagaaggagttcgctgct
gaggagatctcttccatggttctcattaagatgcgtgagattgctgaggcctaccttggt
gtctctatcaagaacgccgttgtcacagttcctgcctacttcaacgactctcagcgtcaa
gctacaaaggatgctggagttattgccggtttgaacgttatgagaatcatcaacgagccc
acagctgcagctattgcctacggtcttgacaagaaggctaccagcgttggagagaagaac
gttcttatattcgatcttggtggtggtacttttgatgtctcccttcttaccattgaagaa
ggtatctttgaggtcaaggcaacagctggtgacacccatcttggtggagaagattttgac
aacagaatggtgaaccacttcgttcaagagttcaagaggaagagcaagaaggacatcacc
ggtaacccaagagctcttaggaggttgagaacctcatgtgagagagcgaagaggactctt
tcctccactgctcagaccaccatcgagatcgactctctctacgagggaattgacttctac
tccaccatcacccgtgctagatttgaggagctcaacatggatttatttaggaagtgtatg
gagccagttgagaagtgtctacgtgatgctaagatggacaagagcactgttcacgatgtt
gtccttgttggtggttccacccgtatccctaaggttcagcaattgcttcaggacttcttc
aacggcaaagagctttgcaagtctatcaaccccgatgaggctgttgcctacggtgctgcc
gtccagggagctattctcagcggtgaaggtaacgagaaggtccaagatcttctgttgctc
gatgtcactcctctctcccttggtttggaaactgccggaggtgtcatgaccactttgatc
ccaagaaacacaaccatcccaaccaagaaggagcaggtcttctccacctactctgacaac
cagcccggtgtgttgatccaggtgtacgaaggtgagagagccagaaccaaggacaacaac
cttctcggtaaattcgagctctccggaatcccacctgctcctcgtggtgtccctcagatc
actgtctgctttgacatcgatgccaatggtatcctcaacgtatctgctgaggacaagacc
accggacagaagaacaagatcaccatcaccaacgacaagggtcgtctctccaaggatgag
atcgagaagatggttcaagaggcagagaagtacaagtctgaggacgaggaacacaagaag
aaggtcgaggcaaagaatgcacttgagaactacgcttacaacatgaggaacacaatccag
gatgagaagatcggtgagaagctccccgcagccgacaagaagaagatcgaggactctatt
gagcaggcgattcagtggctcgagggtaaccagttggctgaagcagatgagttcgaagac
aagatgaaggagttggagagcatctgcaacccaatcatcgccaagatgtaccaaggagct
ggtggtgaagccggtggtccaggtgccgctggaatggacgatgatgctcctcctgcttca
ggcggtgctggccctaagatcgaggaggtcgactaa |
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