Camelina sativa (false flax): 104734263
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Entry
104734263 CDS
T05044
Name
(RefSeq) THO complex subunit 4B
KO
K12881
THO complex subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104734263
09122 Translation
03013 Nucleocytoplasmic transport
104734263
03015 mRNA surveillance pathway
104734263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104734263
03041 Spliceosome [BR:
csat03041
]
104734263
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104734263
TREX complex
104734263
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104734263
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104734263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
104734263
NCBI-ProteinID:
XP_010452098
LinkDB
All DBs
Position
13:complement(683170..684997)
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AA seq
293 aa
AA seq
DB search
MSGGLDMSLDDIIKSNRKPTGSRGRGGVGGNSSGARGGFNGGSGSNSGPSRRFANRVGNR
TAPYSRPTIQQQAQDAMWQNDVFATDASVAAAFGHQAAPIVGGSSFETGTKLYISNLDYG
VSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLM
KVEIVGTNLSAPTLPPMLAPAQIPFPTNGILGNFNENFNGNFNGNFSGNFRGRGRGGFVG
RPRGGFGGGNFRGGRGARGRGGRGNGRVRDENVSAEDLDAELDKYHKEAMETS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggcttggatatgtcactcgatgacatcatcaaatctaatcgaaaacctact
ggatctcgtggccgaggaggcgttggtggtaatagtagcggtgctcgcggaggattcaac
ggcggctccggttccaattccggtccgtctcgtcggtttgctaaccgcgtaggaaacaga
acggcgccgtattcaaggccgacgatacaacaacaagctcaagacgccatgtggcaaaac
gatgtgttcgctacggatgcgagtgtggcggcggcttttgggcatcaagctgctcctatc
gttggtggctcctcattcgagactggaactaagctctacatttccaacttagactatggt
gtctccaatgaggatatcaaggagcttttctcagaggttggtgaccttaagcggtatggg
attcactatgataggagtggaagatcgaagggtactgctgaagttgttttttctaggcgt
ggtgatgccttggcagctgtcaagcgttacaacaatgttcaattggatgggaaactgatg
aaggttgagattgttggaactaatctttcagctcccactcttcctccaatgcttgctcca
gctcagattccttttcctactaacggaattcttgggaactttaatgagaactttaatggc
aatttcaatgggaacttcagtggaaactttagaggaagaggaagagggggttttgtggga
cggccccgtggtggttttggcggaggtaatttccgaggtggtaggggagctagaggacgt
ggtggtcgtggcaatggaagagtacgtgatgaaaatgtatctgcagaggatcttgatgct
gagttggacaagtaccacaaagaggctatggaaacaagttaa
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integrated database retrieval system