KEGG   Camelina sativa (false flax): 104734263
Entry
104734263         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 4B
  KO
K12881  THO complex subunit 4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03015  mRNA surveillance pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104734263
  09122 Translation
   03013 Nucleocytoplasmic transport
    104734263
   03015 mRNA surveillance pathway
    104734263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104734263
   03041 Spliceosome [BR:csat03041]
    104734263
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104734263
    TREX complex
     104734263
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104734263
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104734263
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 104734263
NCBI-ProteinID: XP_010452098
LinkDB
Position
13:complement(683170..684997)
AA seq 293 aa
MSGGLDMSLDDIIKSNRKPTGSRGRGGVGGNSSGARGGFNGGSGSNSGPSRRFANRVGNR
TAPYSRPTIQQQAQDAMWQNDVFATDASVAAAFGHQAAPIVGGSSFETGTKLYISNLDYG
VSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLM
KVEIVGTNLSAPTLPPMLAPAQIPFPTNGILGNFNENFNGNFNGNFSGNFRGRGRGGFVG
RPRGGFGGGNFRGGRGARGRGGRGNGRVRDENVSAEDLDAELDKYHKEAMETS
NT seq 882 nt   +upstreamnt  +downstreamnt
atgtcaggtggcttggatatgtcactcgatgacatcatcaaatctaatcgaaaacctact
ggatctcgtggccgaggaggcgttggtggtaatagtagcggtgctcgcggaggattcaac
ggcggctccggttccaattccggtccgtctcgtcggtttgctaaccgcgtaggaaacaga
acggcgccgtattcaaggccgacgatacaacaacaagctcaagacgccatgtggcaaaac
gatgtgttcgctacggatgcgagtgtggcggcggcttttgggcatcaagctgctcctatc
gttggtggctcctcattcgagactggaactaagctctacatttccaacttagactatggt
gtctccaatgaggatatcaaggagcttttctcagaggttggtgaccttaagcggtatggg
attcactatgataggagtggaagatcgaagggtactgctgaagttgttttttctaggcgt
ggtgatgccttggcagctgtcaagcgttacaacaatgttcaattggatgggaaactgatg
aaggttgagattgttggaactaatctttcagctcccactcttcctccaatgcttgctcca
gctcagattccttttcctactaacggaattcttgggaactttaatgagaactttaatggc
aatttcaatgggaacttcagtggaaactttagaggaagaggaagagggggttttgtggga
cggccccgtggtggttttggcggaggtaatttccgaggtggtaggggagctagaggacgt
ggtggtcgtggcaatggaagagtacgtgatgaaaatgtatctgcagaggatcttgatgct
gagttggacaagtaccacaaagaggctatggaaacaagttaa

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