Camelina sativa (false flax): 104734353
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Entry
104734353 CDS
T05044
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104734353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104734353
03009 Ribosome biogenesis [BR:
csat03009
]
104734353
04131 Membrane trafficking [BR:
csat04131
]
104734353
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104734353
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104734353
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104734353
Membrane trafficking [BR:
csat04131
]
SNARE
SNARE associated proteins
Others
104734353
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104734353
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104734353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
Vps4_C
NB-ARC
TsaE
AAA_24
AAA_lid_PRS2_C
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
104734353
NCBI-ProteinID:
XP_010452210
UniProt:
A0ABM0V7Q5
LinkDB
All DBs
Position
13:complement(1022395..1026146)
Genome browser
AA seq
810 aa
AA seq
DB search
MSNKPESSDSKPKKEDFSTKILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD
TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH
ILPVDDTVEAVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLNI
FKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSAN
PEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFD
STAAGRTTGTAAADPFATSAAAADDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaaccagaatcttccgactcgaaacctaagaaggaggatttcagtactaag
attctcgagaggaagaagtctcccaaccgacttgttgttgatgaagctattaatgatgac
aactctgtcgtctcgcttcaccctgccaccatggaaaagctccagcttttccgaggcgat
acaattctcatcaagggtaagaagaggaaggacactgtgtgcattgcccttgctgatgaa
acatgtgaggaacccaagatcagaatgaataaggttgtaaggtctaacttgagggttagg
ctgggagatgttatttctgttcaccaatgccctgatgtcaagtatggaaaccgtgtccac
atattgccggttgatgatactgttgaagcggttactggaaacctttttgatgctttcctt
aaaccttacttcctggaggcttaccgcccagtgaggaagggagatcttttcctagtaaga
ggaggaatgaggagtgtggagttcaaagtcatcgagactgatcctgctgagtactgtgtg
gttgctccagatacagagatcttctgtgagggtgaaccagttaagagggaggacgaagaa
aggcttgatgaggttggttatgacgatgttggtggtgtcaggaaacaaatggctcagatt
agggaattggttgaacttcccttgaggcatccacaactctttaaatcaattggtgtgaag
ccaccaaagggtattctgctatatggacctcctggatccgggaagactcttattgcccgt
gctgtggctaatgaaaccggagcgtttttcttctgtatcaatggaccggaaatcatgtcg
aagctggctggtgagagtgagagcaacctcagaaaagcatttgaggaggctgagaagaat
gccccttctatcatattcattgatgagattgactctatcgcaccaaaaagagacaagaca
aatggagaggttgagaggaggattgtctctcagctcctgacgcttatggatggtctgaaa
tcccgtgcccatgttattgttatgggagcaacaaatcgccccaacagtattgatccagct
ttgagaaggtttggaaggttcgacagggaaattgatatcggtgttcccgatgaaattgga
cgtcttgaagttcttaggatccacacgaagaacatgaagctagctgaagatgtggatcta
gaaagaatctccaaggacacacatggatatgttggagctgatcttgcagctctatgtact
gaagctgcccttcaatgtatcagagagaagatggatgtgattgacttggaagatgactct
attgatgccgaaatcctcaattccatggcggtgtctaatgaacacttccacaccgctctt
ggaaacagcaacccatccgcacttcgcgaaactgttgttgaggttccaaatgtctcctgg
gaggatattggaggtcttgagaatgttaagagagagcttcaggagactgttcaataccct
gtggagcatccagagaagttcgagaagtttggaatgtctccatcaaagggagttcttttc
tacggccctcctggatgtgggaaaacccttttagccaaagctatagcaaacgagtgccaa
gcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtgaa
gccaacgtccgtgaaatatttgacaaggctcgtcaatctgctccttgtgttctgtttttc
gatgagctagactctattgctactcagagaggaaacagcgtgggtgatgcaggcggtgca
gctgatagagtgttgaatcagcttctgacagaaatggatggaatgaacgcaaagaagacg
gtgttcattattggagcaactaacagacctgatatcatcgatccagctcttcttcgacct
ggaagactcgaccagcttatctacattcccctgcctgatgaagattcacgtctcaatata
ttcaaggcctgcttgagaaaatctcctgttgctaaagatgtagatgtgactgcacttgct
aagtacacccagggattcagtggtgctgatatcactgagatctgccagagagcttgcaag
tacgccatcagagaaaacatcgaaaaggatattgagagagagcgtagaaggagcgcgaat
ccagaagcaatggaggaagatatggtggatgatgaagtatcagagattagagctgctcat
ttcgaagagtccatgaaatacgcaaggagaagtgtgagtgatgctgatattcgcaagtac
caagcttttgctcagacgctgcagcaatcgagagggtttggatctgagttcaggtttgac
tcaaccgctgccggacgcacaactggtactgcagccgctgatccctttgccacttctgca
gctgcagctgatgacgacgatctctacagttag
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