Camelina sativa (false flax): 104734443
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Entry
104734443 CDS
T05044
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104734443
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104734443
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104734443
NCBI-ProteinID:
XP_010452327
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Position
13:complement(1563232..1568388)
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AA seq
516 aa
AA seq
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MVAHERRIHSLQKPTCIGIIWFCLLLSLSHHGRASTSTSIFNLSLPHQHPFPEHVVLNVQ
RKLNDSLSRRQLLTYQQDDGTTASSPIPSCITGNPIDDCWRCDPNWAANRQRLADCSIGF
GQGTLGGKGGRFYLVTDSSDNDAANPVPGTLRHAVIQPEPLWIVFSGDMGIKLKHELIIG
SYKTIDGRGTNIQITGHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRGLSD
GDGISVSASHHIWIDHCSLGYCTDGLIDVILASTAVTVSNNYFFHHDEVMLLGHDDRYTA
DKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGNRYT
APIDPNAKEVTKRVESNEKHWSGWNWRTEGDVMINGAFFVPSGDGVSPAYAKATSVQPKA
AAIIDQLTVNAGVFGDPSGRNGQGGSFSGMTDGGGTITRGYSKSGPGGGGGSSDSDDGIF
TVIFGNNSGAVAPRPGQIWSILFIVILYWYIPHHTR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggtggctcatgagaggaggatccatagtcttcaaaaaccaacgtgcattggcattatc
tggttttgcctcttgctttctctctcccaccatggaagagcatcaacctcaacgtcaatc
ttcaatctttctctcccacatcaacacccattccctgaacatgttgttcttaatgttcaa
agaaaactcaacgactctttatcaagaagacaacttctaacttaccaacaagacgacggc
acgacggcgtcgtcgccaataccttcttgcatcaccggaaacccaatcgacgattgttgg
cgctgcgacccaaactgggcagcaaatcgccaacgactagccgattgctcaattggtttc
ggacaaggaacactcggaggaaaaggcggtcgcttttacctcgtaacagattcttcagac
aacgacgcggctaaccctgttcccggaacacttcgacacgccgtgatccagccggaacca
ctctggatcgttttctcaggcgacatgggaatcaaactcaaacacgagctcatcatcgga
agctacaaaacaatcgatgggagaggcacgaacatccaaatcaccggacatggttgcctc
acgatccagcaagtgagccacgtcatcatccacaacgtccacattcaccattgtaaaccc
tcggggaacacactggtcgcttcgtcgccgacgcacgtcgggttccgaggactctctgac
ggagacggaatctcagtttcagcttcgcatcacatttggatcgatcactgctctctcggg
tactgtaccgacggactcatcgacgtcatcctcgcttccaccgccgtcacagtttccaac
aactatttctttcatcacgacgaggttatgctcttaggtcacgacgaccggtacacggcg
gacaaggggatgcaagtaacaatagcattcaaccatttcggggaagggctcgtgcagagg
atgccacggtgtaggcacggttatatccacgtagtgaacaacgatttcacggcgtgggaa
atgtatgcaattggcggaagtgctagccctacgatcaacagtcagggtaaccgttacacc
gcacctattgatcctaatgccaaagaggtgacgaagcgcgtggagtctaacgagaaacat
tggtcgggatggaactggagaacggaaggtgacgtgatgattaacggagcatttttcgtg
ccgtcaggtgacggagtgagcccagcgtacgccaaagccaccagtgttcagcctaaagcc
gccgctatcattgaccagctcacggtcaacgccggcgttttcggcgatcccagtggaaga
aacggccagggaggaagtttttccggaatgactgacggtggtgggaccatcacacgcggt
tacagtaaaagtggacccggcggcggtggcggcagcagcgacagtgatgacggcattttc
acagtgatattcggtaacaatagcggtgcggtggctccaaggccaggacaaatctggtcg
attctatttatcgtcattttatattggtatattccacaccatacgagatga
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