Camelina sativa (false flax): 104734871
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Entry
104734871 CDS
T05044
Name
(RefSeq) peroxisome biogenesis protein 1-like isoform X4
KO
K13338
peroxin-1
Organism
csat
Camelina sativa (false flax)
Pathway
csat04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104734871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104734871
Membrane trafficking [BR:
csat04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
104734871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_5
AAA_22
NPHP3_N
nSTAND3
RuvB_N
AAA_19
Mg_chelatase
ATPase_2
NACHT
IstB_IS21
AAA_14
RNA_helicase
Bac_DnaA
AAA_18
AAA_7
AAA_24
AAA_11
AAA_2
AAA_30
AAA_28
ATPase
NB-ARC
ORC-CDC6-like
DEAD
ResIII
Sigma54_activat
Zeta_toxin
KAP_NTPase
MCM
KTI12
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
104734871
NCBI-ProteinID:
XP_010452843
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Position
13:3472636..3479974
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AA seq
1129 aa
AA seq
DB search
METEAVVRTVAGVDCFVSLPRQLLHALQSTSSSPLPPLLPVELRSGDRRWSVAWSGSSSS
SSAIEVARVFAESISLPDGTVVQIRVLPNVPKATLVTVEPDTEDDWEVLELNAELAEAAI
LSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLNAKK
SPYAFAPEKECNDLKVLLRVQDTDKSAFRDADVKGFELRVALTSIAYIHPETAKKFSLES
LQLISVSPRIPLKGSAKKDEALDMKNSEASKVAENGTPSAKKEPRQAILRLVFSDLAALG
HLMMPESLRLYLGAGLHSWVYLRGCNVKVHKEIPAFSLSPCVFKISEKEKVLDRGTNILG
NHNSSRKGSHPPSGLSTYMDVVDWSGHDKVVTALSSEGLHGKGNQDNAYQVKNKKALECL
TRLWSLAQLDAIASVTGVDVSSLIVGRETFFHFEVRGLESYKSRDRRSSVNDSWESGKKD
KNAPLEILYVMKVSDESLLGDKFAVYELSLDRSEKRDNEVHIEPVLAKMNLGDPIYWTTS
PKETHFNKGVSPEISSLTWMGPVVLDVIKRMTVLLSPAAAMWFSKFSIPSPGHILIYGPP
GSGKTILARAAAKYFEEQKDLLAHVILVSCSALAFEKVQHIHQVLSGVIAEGLEHAPSVI
ILDDLDSIISSSSDTEGTQASVGITMLTKFLTDVMDDYGEYRNFSCGIGPLAFVASVQSL
EQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLECSEDILLELAAKCEGYDAY
DLAILVDRAVHAAIGRHLPCESNNLSKYSLVKEDFTRAMHEFVPVAMRDITKSASEGGRL
GWEDVGGVTDIKNAIKEMIELPSKYPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAA
CSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVT
DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLMCDFPSPPERLEIL
AVLSRKLPMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEFLNREDKPETGTTPII
TDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSRESKGKRATLA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggaagcggtggttcgtaccgtcgccggcgtagactgtttcgtctcattacct
cgtcagctacttcatgcgcttcaatccactagctcctcccctcttcctccgcttctccct
gttgagctacgctccggtgaccgccgttggtcagtagcttggtccggctctagctcatcc
tcttctgcgatcgaggtcgctcgagtgtttgcggaaagcatatcgttgccggatggtaca
gttgttcaaattcgcgttcttcctaatgtgcccaaggctactttagtaacagtcgaacca
gatactgaagatgactgggaagttcttgagctcaatgctgaacttgccgaggctgctata
cttagtcaggtgaggatactacatgagaccatgaaattccctttgtggttgcatgaccga
actgtgataagattttccgtggtttcaacatttccatcaaaaggggtggtacaacttgtg
ccaggaactgaagtggctgtggctccaaagagacgagacagaaacctcaatgcaaaaaag
agtccttatgcttttgctccagaaaaagaatgtaacgatctgaaggttctattacgtgta
caagatactgataaatcagcctttcgtgatgctgatgtcaaaggatttgagctaagggta
gccctcacttccattgcctatattcatccagaaaccgccaagaaattttctctagaatct
cttcagttgatatctgtatcccctagaatacccttgaaaggtagtgcaaaaaaggatgaa
gcattagatatgaaaaacagtgaagcttcaaaggtggcggaaaatggcactccaagcgca
aagaaagagccccgtcaagcgattcttcgtcttgtcttttcagatttagctgctcttgga
catctaatgatgcctgagtctcttcgtctctatctaggagcaggcctacactcatgggtt
tacttaaggggatgcaatgtaaaagtacacaaagaaattcctgctttttcactttctcct
tgcgtcttcaagatttctgaaaaggaaaaggtgctggatagaggtacaaatattcttggt
aatcataattctagtagaaaaggcagtcatccaccttctggcttgagcacctatatggat
gttgttgactggtctgggcacgataaggttgttacagctctttcatctgagggtttgcat
ggcaaaggaaatcaagataatgcctatcaagttaagaataaaaaagcattggaatgcctt
actcgcctgtggtcattggcacagcttgatgctattgcgtcagtcacaggagttgatgtt
agttcgttaattgtaggaagagaaacgtttttccatttcgaagtaagagggctcgaatct
tataaatcaagagataggcggtcttctgttaatgatagttgggaaagtgggaagaaggat
aaaaacgctcctttagaaattttgtacgtcatgaaggtctctgatgagtctttgcttggt
gataaattcgctgtgtatgagcttagcctggatagaagtgagaagagggacaatgaggtg
catattgagccagtgcttgcgaagatgaatcttggcgacccgatatattggacgacgtct
cctaaagaaacacactttaataaaggtgtttccccggaaatctcttccttgacgtggatg
ggcccagttgtgttggatgttatcaagcggatgaccgtgttgttgtctcctgcagccgca
atgtggtttagcaagttcagtattccatcacctggacatattctcatatatgggcctcct
ggttcaggaaagacaatattggcaagagctgctgcgaagtacttcgaagaacagaaagac
ttgttggcacatgtgattctggtatcttgttctgcacttgcctttgagaaggttcaacac
atccatcaagttctttctggtgtaatagctgagggcttggaacatgcaccatctgtcatc
attttggatgatcttgatagcattatctcatcgtcttcagataccgagggaacacaagct
tcggttgggattacgatgcttacaaaattcctaacagatgttatggatgattatggggag
tacaggaatttttcttgtggaattggtccacttgcatttgttgcttctgtccagtctctg
gaacaaattccacagacattgagctcatcaggaaggtttgacttccatgtgcaactggct
gctcctgctacctcagaacgtggggccatactgaagcacgagatacagaaacgcctttta
gaatgttcagaagacatattgcttgaattagctgctaaatgtgaaggatatgatgcgtat
gacttggcaatattggttgatagagctgttcatgctgccattggccggcatctaccttgt
gaatcaaataatctatccaaatattctttggtcaaagaagactttactcgagctatgcat
gaatttgttcctgttgccatgcgtgacatcacaaaatctgcctctgaagggggtcgtttg
gggtgggaagatgtgggaggtgtgactgatattaaaaatgctatcaaagagatgattgag
ttgccatcaaaatatccgaaaatctttgcaaaatctcctttgcgtttgagatcgaatgtt
ctcttgtatggtccacctggttgtgggaagactcacattgttggggcagctgctgccgcg
tgttccctacggtttatatcggtgaaggggcctgagctgttaaacaaatacattggtgca
tctgaacaagcggtccgtgatatattttcaaaagcagcagcggcagcaccgtgcatactc
tttttcgatgaattcgattccattgctccgaagagaggacatgacaacaccggagtaact
gatcgagttgttaatcaatttctgacagaactggatggagttgaagttctgaccggggtc
tttgtttttgctgcaacgagtagaccagatttacttgatcctgcgctcctaaggcctggc
cggcttgatcgtttgcttatgtgcgactttccttccccaccagagcgattagagattctt
gcagttctttcgagaaagcttccgatggctgatgatattgacttagaacctatagctttg
atgactgaaggcttcagtggagctgatcttcaagctcttctctcagatgcccagcttgca
gctgttcacgagtttctgaacagagaagataaacccgaaaccggaactacgccaataata
accgatcctcttctgaagtcgatcgcttcaaaaactaagccatcggtttccgagaccgag
aagcaaaagctctatgacatatatagccagtttctggattcaagaaaatcgtcaagagaa
tcaaagggcaaaagagcaaccttagcataa
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