Camelina sativa (false flax): 104735337
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Entry
104735337 CDS
T05044
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104735337
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
104735337
NCBI-ProteinID:
XP_010453404
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Position
13:5586477..5589683
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AA seq
658 aa
AA seq
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MDGTEYIATHITPCVCFLLQNSQALRERRPRQNLRFPLTICKQFRDKTWTGFCFFVDSQK
QQASMLPKLDPTNQKACLSLLEDVTTNVKQIQDYVLEAILSRNAQTEYLRGFLNGQLDKE
SFKKNLPVVTYEDIRSYIDRIANGEPSDLICDRPISVLLASSGTSGGVPKLIPLTTEDLE
QRKSFTSLSTLLIYKHIQGLNEGKSLMFYFVTRESETTSGLMVRTMLTSFLKSYKPTNSS
FWDQTHISPLAISTCADTTQSMYCQLLCGIVDRDNVARLGAAFASSFLKVIKFLKDHWPD
FCSNIRTGRVSDWITDAECVSGISKFLTAPNPELASLIEQECSKTSWEAIVTRLWPKAKC
IEAIVTGSMAQYIPLLEFYSGGLPVISRSYVTSECFIGINFNPLCKPCDVSYTIIPSMGY
FEFLEVEKDHQEASHDSAKPLVVDLVDVKVGHDYEPVLTTFSGLYRYRVGDVLRVTGFYN
NAPHFRFLGRQKVVLSIDMDKTSEEDLLKAVTNAKLLLEPHDLMLMDFTSRVDSTSFPGH
YVLYWELGSKVKNAKLEPDPNVLEECCFIVEESLDAVYRKLRKNDKSIGPLEIKVVKPGA
FDELMNLFVSRGSSVSQYKTPRSVTNEDALKVLEKNVLSKFLSRKTPTWELHERYSTR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaccgaatatatcgccacacacatcacaccttgcgtctgctttctcctccaa
aattctcaagcgttaagagagaggaggcctcgccagaacttgaggtttcccctcactatt
tgtaagcagtttcgtgataagacttggacagggttttgcttttttgttgacagtcaaaag
cagcaagcaagcatgttgccaaagctcgatccaacaaaccaaaaagcttgtctgtctctt
cttgaggatgtgaccaccaacgtaaagcagattcaagattacgtcttggaggcaatactt
tcacgtaatgctcaaaccgagtatcttagaggtttcctcaacggtcaactcgataaggaa
agcttcaagaagaacctacccgttgtgacctacgaagatatcaggtcttatattgatcgt
atcgccaatggagagccgtctgatctcatctgtgatcgacccatcagtgtactcttggcc
agctcgggtacttcaggaggagttccaaagttgattcctttgacaacagaggatttggaa
cagaggaaatcgtttacatctctctctacacttctaatctacaagcacatacaagggctt
aacgaaggaaaatctcttatgttctattttgtgacccgagaaagcgagactacctctggt
ttgatggtcaggactatgctaacttcctttctgaaaagctacaaacctaccaactcatct
ttttgggatcaaacacatataagcccgcttgcgatttccacttgtgcagacactactcag
agcatgtactgccaattgctttgtgggattgtagatcgagataatgtagctcgcctcggt
gcagcttttgcttcttccttcctcaaagtaatcaagttcttgaaagatcactggcctgat
ttctgctcaaacattaggactggccgtgtcagcgactggatcacagacgctgaatgtgtt
tcagggatcagtaagttcctcaccgctccaaatccggaactagcgagcctgatcgagcaa
gaatgcagtaaaacttcatgggaggcaatagtgacaagactatggccaaaagcaaaatgc
attgaagccatcgttaccggctccatggcacagtacattccattgctggaattctatagc
ggtggtcttcctgtgatttcaaggtcgtacgtcacctctgaatgtttcatcggaatcaat
ttcaatcccctgtgtaagccttgtgatgtgtcctacactatcatcccatctatggggtac
tttgagttcttagaagtcgagaaagaccatcaagaagctagtcatgattccgcaaaacct
ctagttgtggatcttgttgatgttaaagtcggtcatgattatgaacctgttctcacaacg
ttttctggtctgtataggtaccgtgtgggtgatgttttaagagttactggtttctacaac
aatgcaccacattttcgtttcctgggaagacagaaagttgttctgagcatagacatggac
aagacctctgaagaagacctcctcaaggcagtgacaaacgcgaagctcctgcttgagcca
cacgacctaatgctcatggatttcactagccgtgtggattcaacctcgtttccaggacac
tacgtactctactgggaactcggaagcaaagtcaaaaacgcgaagctcgagcctgacccg
aatgttttggaggaatgttgcttcatcgttgaggagtctctcgacgctgtgtacagaaaa
ttaagaaagaatgataagagcattggaccacttgagattaaggttgttaagcctggcgct
ttcgacgagctcatgaatttgttcgtgtctcgaggctcttctgtgagtcagtacaagaca
cctagatcggtgacgaatgaagatgccttgaaggtattggagaagaacgttctttccaag
ttcctaagccggaaaactccaacgtgggagttacatgagcgatactccacccgctaa
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