Camelina sativa (false flax): 104735413
Help
Entry
104735413 CDS
T05044
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
104735413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104735413
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
104735413
Membrane trafficking [BR:
csat04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
104735413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
104735413
NCBI-ProteinID:
XP_010453503
LinkDB
All DBs
Position
13:5966187..5972659
Genome browser
AA seq
1024 aa
AA seq
DB search
MDLAKFLCWVVLLLGISLVESKYMVYNTSHTIVPGKLNVHVVPHSHDDVGWLKTVDQYYV
GSNNSIQVACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWNEQSETIKRIVKDLIHSG
QLELINGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAYLL
GAEVGFDSVFFGRIDYQDREKRKKEKSLEVIWRGSKSLGSSSQIFAGAFPKNYEPPPGGF
YYEINDDSPVVQDDPDLFDYNVQERVNAFVAAALDQANITRTDHIMFTMGTDFRYQYAHS
WFRQMDKLIHYVNLDGRVNAFYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWTGY
FTSRPALKRYVRVMSAYYLAARQLEFFKGRSEKGPTTDSLADALAIAQHHDAVSGTSKQH
VADDYAKRLAIGYVEAESVVATSLAHLTKADPALNSTFQQCLLLNISYCPSSEINLSDGK
SLIVLAYNPLGWKRVDIVRLPVVGGDIAVHDSEGHEVESQLVPFTDEYVALRNYHVEAYL
GQSPTQVPKYWLVFSVTVPPLGFTTYTISTAKKTGGYISKSYVSKLQKGEQSKFDVGHGH
LKLSFSTDQGTEINYVNSRTWMTEPVKQTYSYYSAYNATNDKEPPTPQNSGAYVFRPNGT
FPIKPEGQVPLTVIRGPLVDEVHQQINPWISQINRVYKGKEHVEVEFIVGNIPIDDGVGK
EVVTQISSSLKSNKTFYTDSSGRDYIKRIRDYRSDWKLEVNQPVAGNYYPINHGIYLQDS
KKEFSVMVDRAFGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQNKCTGLTIQGK
YYYRIDPYGEGAKWRRTFGQEIYSPLLLAFAEQDDGKPMSFGAASFSGIDPSYSLPENVA
LLTLQELDDGNVLLRLAHLYEVGEDKELSGVTSVELKKLFPGKKIGKVTEMSLSANQERS
VMEKKRLMWKVEGEGSYEEEKKAKRGREIDPRKLEMELYPMEIRTVLIHLELPSSHSRIN
RFDA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgcaaagtttctatgttgggttgttttgcttcttggaatctcactcgtagaa
tccaagtacatggtctacaatacttcacataccattgttcctggaaaacttaatgtccat
gtggttcctcattcccacgacgatgttggttggctcaagactgttgatcagtactatgtt
ggctctaacaactcaatccaggtcgcttgtgttcaaaatgtgctggattcacttgttcct
gcgctgctcgctgataagaatcgcaaattcatttacgttgaacaggcgttttttcagcga
tggtggaatgaacaaagtgaaacaataaagcgtattgtgaaagatctaatacactcaggc
caactagagctcataaatggtggtatgtgcatgcatgatgaagcagcaccacattatata
gacatgattgatcaaacaaccctcgggcatcgattcattatcagagagttcaatgtgact
ccaagaatcggttggcagattgatccttttggccattctgcagtgcaggcttacttgcta
ggcgcagaagttggcttcgactcagtcttctttggccggatagattaccaagatagggag
aagcgtaaaaaggagaagagtcttgaagttatatggcgaggctctaagagtttaggttct
tcttcacagatttttgctggtgctttccctaagaactacgaacctccacctggtggtttc
tactatgaaatcaacgatgattcccccgttgttcaagatgatccggacctgtttgattac
aatgttcaagaacgagtgaatgcctttgtagctgcagctctggatcaggccaacattact
cgaacagatcacattatgtttaccatgggaacagatttcaggtaccagtatgcacactct
tggtttcgacaaatggacaaacttatccattatgttaacctcgatgggcgtgtcaatgct
ttctactctaccccttccatatatacagatgcaaaacatgcggcaaatgaggcttggccc
ctgaaaacagaggactatttcccttatgcagatcgtataaatgcttactggactggatat
ttcacaagtaggccagcacttaagcgttatgtcagagtgatgagtgcctactacttggca
gcaaggcaacttgagtttttcaaagggagaagtgagaagggtccgacgactgattcgtta
gcagatgcactagcaattgctcaacatcacgacgctgtttctggtacatcgaaacagcat
gtggctgatgattatgcaaaaagactagcaataggctatgtggaggctgagagtgtggtt
gctacttctcttgctcatctgactaaagcagatcccgccctgaattcaaccttccaacag
tgtttgttactcaacataagttactgtccctcaagcgaaatcaacttatctgatgggaaa
agtttgatcgtattggcttataacccacttggatggaagcgagtggacattgtccggctt
cctgttgtgggcggagacattgcggtacatgactctgagggacacgaagtagagtctcaa
ctcgttccatttactgatgaatatgtggccttaaggaactatcatgtagaggcatactta
ggccaaagccctacacaggtgccaaagtattggcttgtgttttcagttactgtgcctcct
cttggcttcactacttacactatctccactgctaagaaaacaggtggatatattagcaaa
tcatatgtctccaaattacaaaaaggcgagcaatcaaaatttgatgttggtcatggccat
ctgaaacttagtttttccactgatcaagggacagaaatcaattatgttaacagcagaacc
tggatgacagaaccagtcaaacagacatatagctactactctgcatacaatgcaacgaat
gacaaagaacctcctacacctcagaactcgggtgcgtatgttttccgtccaaatggcaca
ttccccatcaaaccggaaggacaggttcctttgactgttatacgtgggccgctggtggat
gaggtacatcaacaaattaatccatggatatctcagatcaatagagtttacaagggcaag
gagcacgtggaagttgaatttattgttggtaatataccgattgacgatggggttggcaaa
gaagtcgtaactcagatctcaagttccctgaaaagcaataaaactttctacacagattca
agtggacgtgattatatcaaaaggatccgtgattataggtcagactggaaactagaagtc
aaccaacctgttgcaggaaattattacccgattaatcatggaatttacttgcaagacagt
aagaaagaattctcagtgatggttgacagagcctttggagggtcgagcatagtggacgga
caagttgagcttatgcttcataggagactgctcctcgatgactccagaggtgtagcagaa
aatctaaacgagacagtgtgtgttcaaaacaagtgtactggactaactatccaaggaaaa
tattactatagaatcgatccatatggagaaggtgcaaaatggcgacgaacattcggacaa
gagatctactcgccactcctcttggcctttgctgaacaggatgatggaaagccgatgagt
tttggtgcagcatcgttctctggaattgatccatcctatagtttgcctgaaaatgtggca
cttctgactctgcaggaactggatgatggaaatgtgcttctgcgtctagctcatctttat
gaggtgggggaggacaaggaactttcaggagtgacaagcgtggaactgaagaagctattt
cctggaaaaaagatagggaaagtgacagagatgagcctatcagcaaaccaagaaagaagc
gtcatggagaagaagaggttaatgtggaaagtagaaggtgaaggatcttatgaagaagag
aagaaggcgaagagagggagggaaatcgatccaagaaagctggagatggagctttacccg
atggagattaggacagtgttgatacacttggaacttccatcttctcattctcgcataaac
agattcgatgcctaa
DBGET
integrated database retrieval system
