Camelina sativa (false flax): 104735483
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Entry
104735483 CDS
T05044
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104735483
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104735483
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF5666
Motif
Other DBs
NCBI-GeneID:
104735483
NCBI-ProteinID:
XP_010453593
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Position
13:6258526..6262623
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AA seq
455 aa
AA seq
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MNKLTLQYLSLNFLLLISLISSRFGTCDARHSVYWKGNRRSVAEGKSSPTVNVLDNGAKG
DGTSDDTKAFEDAWREACKVAASTLLVPSGSTFLVGPVSFLGKECKENIVFQLDGKIIAP
TSSSAWGSGLLQWIEFKSLTGITIKGKGIIDGRGSVWWNKSPDYDPADESESTTESDMVK
EQLGTKMPKTKPTALRFYGSNGVTVNGITIQNSPQTHLKFDNCMSIQVSDFTTSSPGDSP
NTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNIYIHDVDCGPGHGISIGGLGKDNTK
ACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSDVANPIIIDQYYCDGGG
CHNETSAVAVSNINYINIKGTYTKQPIRFACSDSLPCTGISLSTIELKPATEKASSLDPF
CWEAHGELKTQTLPPIQCLKTEKSPEASQSNNDDC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactaaccttgcagtatctttccctgaactttctcctcttaatctccttaatc
tcttcgagatttgggacttgtgacgctaggcacagtgtatactggaaaggaaatcgcagg
tctgtcgccgaagggaaaagttccccaacagtcaatgtgcttgacaatggcgcaaaaggt
gatgggacaagtgatgacacaaaggctttcgaagatgcttggagggaagcttgtaaggtg
gcagcgtcaacattattagttccctctggttctacgttccttgttggacctgtttccttc
ctgggaaaagaatgcaaagagaacatcgtgtttcagctagatggaaagatcatagctcca
acgagttcaagtgcatggggttcaggtctcttgcaatggatagaattcaaatcacttaca
ggaatcactataaaaggaaaaggaataattgatggacgaggatcagtatggtggaacaag
tcccctgactatgatccagctgatgagtcagagtcaacaactgagagcgacatggtgaaa
gaacaactgggtacaaaaatgccaaagactaaaccaacagctttgaggttctacggaagt
aatggtgtaacagtcaatggaataaccatacaaaacagccctcaaacccacctcaagttt
gataattgcatgagcattcaagtgtctgattttacaacttcatcccccggagattccccc
aacacagatggaatccacctgcaaaactctcaagatgccgttatttaccgcagcacgctg
gcttgtggagatgattgtatatcaattcaaactggatgctctaatatctacatacatgat
gtagactgtgggcctggccatggaattagcatcggaggactgggaaaagacaatacaaaa
gcgtgtgtttcaaacattactgtccgtgatgtcacgatgcatgaaactacgaatggagtt
aggataaaatcctggcagggagggtcagggtctgtaaaacaagttatgttttcaaatatt
caagtcagcgacgtagccaatccgataataatagatcaatactattgcgatggtggagga
tgccacaacgaaacttcagcagtggctgtatcaaacataaactacataaacataaaaggt
acctacacaaagcaacctatacgcttcgcctgcagtgatagcttgccatgcacaggaatc
tcactgtcgaccatagagcttaagccagccacagaaaaagctagctcacttgatcctttc
tgctgggaagcacacggtgaactgaaaacacaaactctaccaccaatacaatgtttgaaa
acagaaaagtcaccagaagctagtcagtctaataatgatgattgctaa
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