Camelina sativa (false flax): 104735528
Help
Entry
104735528 CDS
T05044
Name
(RefSeq) probable pectate lyase 19
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104735528
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104735528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104735528
NCBI-ProteinID:
XP_010453638
UniProt:
A0ABM0VB88
LinkDB
All DBs
Position
13:6463319..6465514
Genome browser
AA seq
490 aa
AA seq
DB search
MEMATLLKLMFMFCIAGLIPTIRGNISELDEYWSRRADEAREFTLQAYHSDPYEIVDHFH
ERHYDNSTDATETEEDGAVQLEEEHVGAQVEEEHGGAKPEEEEEEGIKMVGNSTNSTRRS
LRGKGKGKWSKLKGPCTASNPIDKCWRCRSNWAKRRKKLTRCVRGFGHRTTGGKRGRIYV
VTSNLDEDMVNPKPGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHI
AHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWL
DHISMSKCQDGLIDAIVGSTGITISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFG
KGLVQRMPRIRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKR
DYAPEDEWKHWNWRSEKDVFMNGAYFRQSGNPHFKCTHTRKQMIKHKNGMAVSKLTKYAG
ALDCRVGKRC
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctacgttgttaaagttgatgtttatgttttgtattgccggtctgattccg
accatacgaggcaacatttctgagttggacgagtattggtcgcgacgagccgacgaagcc
cgagaattcactctacaagcttatcattctgatccttacgaaatcgtcgatcactttcat
gagcgtcattacgacaactctactgatgctacggagaccgaggaagatggcgctgtgcag
cttgaagaggaacatgtcggtgcgcaggttgaagaggaacatggcggtgcgaagcctgaa
gaagaggaagaagagggtattaaaatggtcggaaactcgacaaacagcacgagacgaagc
ctaagaggtaaaggcaaaggaaaatggagtaaacttaagggaccttgtaccgcaagtaac
ccgatagataaatgttggcgttgccgttcgaattgggccaagcgtcgtaagaagctcaca
cgttgcgtccgagggttcggtcacaggacgaccggaggaaaacgcggacgcatctatgtg
gtcacaagcaacctcgacgaggacatggtgaacccgaaacccgggacattgcgtcacgcc
gtaatccagaaggaacctctctggatcattttcaagaacgacatgagcattcgcttaaac
caagagcttctgattaatagccacaagacgatcgatgcacgaggagctaacgtccatatc
gcgcatggcgcagggatcacgatgcagtttgtaaaaaatgtcatcatccatggattgcac
attcaccacatttctgagagtagcggtggtatgatccgagactcggtagaccatttcgga
atgaggactagagccgatggagacggtttatcgatttacggttcgtctaacatttggctt
gaccatatttcgatgtcaaaatgtcaagatggactcattgatgccatcgttggatccact
ggcattacaatctccaactctcacttcactcatcacaacgatgtgatgttgcttggtgcg
caaaacacgaacgaagcagacaagcatatgcaagtcacagtggcctataaccattttggt
aaaggacttgtacagaggatgcctaggatccgatggggatttgttcatgttgtgaacaac
gactacactcattgggagctttacgcaattggaggtagtcaaggtccaacaattctcagc
catggaaaccgattcatagctcctcctcacaaacctcattacagagaggtgacaaagagg
gattatgctccggaggacgagtggaaacactggaactggagatccgagaaagatgtattc
atgaacggagcttatttcagacaatctggtaaccctcacttcaaatgcacacacactagg
aaacaaatgatcaaacacaaaaatggaatggctgtttctaagctgaccaagtacgccgga
gcacttgattgcagagtcggaaaacgctgttag
DBGET
integrated database retrieval system