KEGG   Camelina sativa (false flax): 104735572
Entry
104735572         CDS       T05044                                 
Name
(RefSeq) nipped-B-like protein B
  KO
K06672  cohesin loading factor subunit SCC2
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104735572
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    104735572
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT PDS5 PHD Cnd1 PHD_2 zf-RING_15 PHD-1st_NSD PHD_4
Other DBs
NCBI-GeneID: 104735572
NCBI-ProteinID: XP_019090431
LinkDB
Position
13:complement(6643800..6654804)
AA seq 1846 aa
MSNQSSSGWGSTSTSTQFGIGLANTVQSEAAPNLPLPSLPLFCGAAEPGEFKLFDEVAQR
SGYRSLDRSEILAQSSRIANMLHETDVSYLDLRNEAVALNCNSVEHSQLYDQVLRCNPGA
FEYVIPGPTCDSVFTNEEPQKIISEPSVPVQIQRQTDNHLARNIQPEPVKRVFPSNHLED
HSLQHEPLTNQSPKDVTAYHDSRPETSTMNEISASKKPKGKKKRKDDSFSVQPDPSVLQE
SIVTSFCEMLEDFCGRAEVSGDDRDEAEWLPVPVDEVRVLVNELMSIRSKMLLHMVPVDI
LSRLLHTLDHQIHRAEGLSIYSEHADSDSVLLVLGALESIHASLAVMANSDMPKQLYKEE
IIERILEFSRHQMMAVMSAYDPSYRTASKPVENVAFEGDDDDDHDHDMGSASKRRRIGKI
GKVKKSAVNRISGAVNTAQQKLCTILGLLKDLLLVERLSDSCILQLLKTSITTFLVENIQ
LLQLKSISLIGGIYNSYAQHRTYVIDEISQLLWKLPSSKRALRAYLLPDEEQRQIQMVTA
LLIQLVHNSTSLPETSRQASSGNSILDIPVDVGYLTKCHEAATETCCLFWTRVLERFASF
KGQDASEIKLIIENLVIDLLTALNIPEYPSVSPILEVLCVILLHNAGLKSKDISARLMAI
DLLGTIAARLKRDAVLCSKEIFWTSLESDSETSVDQVCAKDCAVCLGKTAGSLLVCQICQ
RRFHADCLGLKELDIPSRNWHCPFCVCKRQLLVLQSYCKTDTKSTGKLESEENIGNLNMI
TKTEVVQQMLLNYLQDAGSVDDVHTFICWFYLCLWYKDVPKSQKKFKYYIARLKAKSIIR
NSGATNSFLTRDAIKKITLALGLNNSFSRGFDKILHMLLASLRESAPNIRAKALRAVSII
VEADPEVLCDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGIKYFEKVAERIKD
TGVSVRKRAIKIIRDMCTSNPNFSEFTSACAEILSRISDDESSVQDLVCKTFYEFWFEEP
PGHHTQFASDASSIPVELEKKTKQMVGLLSRTPNHQLLVTIIKRALALDFFPQAAKAAGI
NPVALASVRRRCELMCKCLLEKILQVEEMSREEGEVQVLPYVLVLHAFCLVDPGLCTPAS
DPTKFVITLQPYMKSQGDSRTGAQLLESILFIIDSVLPLIRKLPLSVTEDLEQDLKHMIV
RHSFLTVVHACVRCLCSVSKLAGKGVSIVEHLLQFFFKRLEAQGSDNTQIAGRSLFCLGL
LIRHGNTLISTSGGKIFNLSGCLNLFKRHLQTEDLALKVRSLQALGFILIARPEYMLEED
IGKIIESTLSDEANGRMKMQSLQNMYEYLLDAEKQLGSEKASDNIVKTIEQGGHAVPVAA
GAGDTNICGGIVQLYWDKILGRCLDFDDQIRQTALKIVEVVLRQGLVHPITCVPYLIALE
TDPQEANQKLAHHLLMNMHEKYPAFFESRLGDGLQMSFIFMQSISQVTSEPNQSLQQKRS
TNMSGKNDHTNSTLTQARLGVSRIYKLIRGNRISRNKFMTSIVRKFDNPTWSESVISFLK
YCTETLALLPFTSPDEPLYLVYSINRVMQIRAGAVESNLKASLHKDSTKTQHGNGTYQQH
SLPGHMHMMDLNTRIQDEPMHWNSYGHPTPIDLNGAAYQNPRDQFTSYQVHNGNADVHKT
TSSDPPELSTDDLQKIQVDCLAAIAIQLLLKLKRYLKVTYSLIDDRCQAYSPTEPLKLGD
PLSKQNIAFDLSETRTDLPSTYPDLVQRYQEFKNAMREDTVDFTIYSASFKRKRPTPRKT
SRSAKKAVAYNEDDEDDDEDDKGWHGGGGRGASRRLSYSTRSSNRR
NT seq 5541 nt   +upstreamnt  +downstreamnt
atgagcaatcaaagcagttccggctggggttcgacttcgacttcgactcagttcgggatt
ggtttggctaatactgttcagtccgaggctgctcctaacttgccgctaccgtcgttacct
ttattctgcggtgccgctgagcctggggagttcaagctcttcgatgaggttgcccaacgt
agtggttacaggtcgttggatcgcagtgagattctagcgcaatccagtagaatcgcaaac
atgcttcacgagactgacgtttcttatctggatcttcgaaacgaagctgtggctcttaat
tgtaattctgtggagcattctcagttatacgatcaagttctacgatgcaatcctggagca
tttgagtatgttatccccggtccgacctgcgattcagtctttaccaatgaagagcctcaa
aagataatttctgagccaagtgttcctgtccagattcaacggcagacggataatcattta
gctaggaatatacaacctgaacctgtgaaaagggtattcccatcaaatcatcttgaagat
catagtttgcagcacgaacctttgacaaaccagtcaccgaaagatgttaccgcgtatcat
gactctcggcctgaaacgagtaccatgaatgaaatttctgcttccaagaagccaaaggga
aagaagaaacgtaaagatgactcgttttcagttcaaccagatccatctgtgctgcaagag
tccattgtaacaagcttttgtgagatgttagaagacttctgtggcagagctgaagtctct
ggtgatgatagggatgaagcagagtggttaccagtgcctgttgatgaagtccgtgttctt
gtaaatgaattgatgtctatacggtcgaaaatgcttctgcatatggtacctgttgatatt
ctatcgaggttattgcacactctggatcatcagatacacagggcagaaggcttgtccatt
tatagtgaacatgcagattcagattcagtgttattggttcttggtgcccttgagtcaatc
catgcatcacttgcagtgatggccaacagtgatatgccaaagcagctctacaaggaggag
ataattgagagaattctggagttttctaggcaccaaatgatggctgttatgtctgcttat
gatccatcataccgtactgcaagtaaaccggtagaaaatgttgcatttgaaggtgatgat
gatgatgatcacgatcatgacatgggctcagccagcaaaaggcggcgcataggaaagatc
ggcaaagtgaagaagtcggcagtgaacaggatctctggagcagtgaatactgcacaacag
aaactttgcactattcttggcttactcaaggacctgttgttggtagaaaggttgtctgac
agttgcattttacaattgttgaagacaagtattacgacatttctggtggaaaacatccaa
cttctacaacttaaatcaattagcttaatcggtggtatatacaattcatatgctcaacac
cgaacgtatgtgatagatgaaatatctcaattactatggaagttaccttcctcgaaacga
gcattgagagcgtatcttctccctgatgaagaacagaggcagattcaaatggtcactgct
ttgcttattcagttggttcacaacagcacaagccttcctgaaacctcgagacaggcttcg
agtggaaactccatactggatatcccagttgatgttggctacctaactaaatgtcatgaa
gcggctacagaaacatgttgcctcttctggactcgtgtccttgaacgatttgccagtttt
aagggtcaggatgcttcagagatcaaattgattattgagaatcttgttatagatttactg
acagcattgaatattcctgaatatccatccgtgtctcctatccttgaggttctctgtgtc
atactgctgcataatgcagggttgaaatcaaaagatatctctgctcgattaatggccatt
gacttgttgggtacaattgctgcaaggttaaaacgtgatgctgtcctctgcagtaaagaa
attttctggacgtcactagaatctgatagtgaaactagcgtcgaccaagtttgcgcaaaa
gattgcgctgtttgtttaggtaaaacggccgggagcttattggtctgtcaaatctgtcaa
aggcggtttcatgctgactgtttgggtttaaaggaactagacattccaagtcgaaattgg
cactgtccgttttgcgtgtgcaagaggcaacttcttgtactacagtcttactgcaagaca
gacacaaagagtactggtaagttggaatcagaagaaaacatcggaaacttaaatatgatc
acgaagactgaagttgtgcaacagatgctcttgaattaccttcaggatgcaggatctgtt
gatgatgtgcatactttcatttgctggttttatctgtgcctttggtataaagatgtcccg
aaatctcagaagaaattcaaatattacatcgccagactgaaagcaaagtcaataatccgt
aactctggagcaactaattcgttcttgacaagagatgctatcaagaagattactttagcg
cttgggctaaataattccttttccagaggatttgataagattctacacatgcttctggct
agtttaagagagagcgctcccaatattagggccaaagctttgcgagcagttagtataatt
gttgaagctgatccagaggtactttgtgataagcgtgttcagttggctgttgaaggaagg
ttttgtgattctgcaatatctgttagagaagcagcactggaacttgttggcaggcatatt
gcatcacatcctgatgttggtataaagtactttgagaaggttgctgagaggattaaagat
actggagtgagtgttcgaaaacgagccatcaagataatacgtgacatgtgtacttcaaat
cccaacttctctgaatttacaagtgcgtgcgcggagatattatctcgtatcagtgatgat
gagtctagcgttcaggatcttgtgtgcaaaactttctatgaattttggtttgaggaacct
ccagggcatcatactcagtttgctagtgatgctagctccattccagtggaactggaaaag
aaaaccaaacaaatggttgggttgttaagcaggaccccaaaccaccagcttcttgtgaca
attattaagcgtgccttggctttggattttttccctcaagcagctaaagctgctggtatt
aacccagttgctcttgcatcagtacgcaggcgttgcgagttgatgtgcaagtgcttactg
gaaaaaatattacaggtcgaagaaatgagccgcgaagaaggagaggtgcaagtacttcct
tatgtacttgttttgcatgctttttgtctggtggatcctggtctgtgtacaccggcctca
gaccctactaagtttgtcatcaccctacagccatatatgaagagtcagggtgatagtcga
actggagcacaattactagagagtattcttttcattatcgattctgtcctacccttgatc
cgcaagctgcctttaagtgtcacagaagatctagaacaagatctaaagcatatgattgtt
cgacattcgtttctaactgttgttcatgcatgtgttaggtgtctctgttctgtgagtaaa
ttggcgggaaaaggtgttagcatagttgagcatcttcttcagttcttttttaagcggctg
gaggcccaaggttccgataacacacagattgctgggcggtccctcttttgtcttggctta
cttatccgccatggaaacactcttattagcacctcgggtggcaagattttcaatctctct
ggctgtcttaatttatttaaacgacacctccaaacagaagatcttgctttgaaagtcagg
tcgttgcaggctttaggattcatcctaattgcacgacctgagtacatgttggaagaagac
attggaaaaataatcgagagtacattatcagatgaagcaaacgggcgtatgaagatgcaa
tcattacaaaatatgtatgaataccttcttgatgcggaaaaacaattgggatccgagaaa
gccagtgataacatagttaaaacaattgagcaaggtggccatgcagtacccgtggccgct
ggtgcaggtgacaccaacatttgcggaggcattgtgcagttgtattgggataagatatta
ggtagatgcttggactttgatgatcaaattcgccagactgctctcaagatagtggaagtt
gtactacgtcaaggtctagttcatcctattacgtgtgttccttatttgatcgccctcgag
acagatcctcaagaggccaaccaaaagctggcccatcatttactaatgaatatgcatgag
aagtatccggcattttttgagagccgtctcggtgacggactccaaatgtcgttcatcttc
atgcaatccatcagccaggtcacttcagaaccaaatcaaagtcttcagcaaaagagatcg
acaaacatgtcggggaaaaatgatcatactaatagtactctcacacaagctagacttggc
gtctctaggatctacaagcttatccgtggaaaccggatttctcgaaacaaatttatgact
tcgattgttcgcaagtttgataatccaacctggagtgaatcagtaatatcatttctgaag
tattgcactgaaacccttgctttacttccattcacatcacctgatgagccgctctatctt
gtatattccataaaccgagtaatgcaaattcgagctggtgcagtcgagtcaaatttgaag
gcttcgttacataaagattccacaaagactcagcacggaaatggaacataccaacaacat
tcgcttcccggacatatgcacatgatggatctaaacactagaatccaagatgaaccgatg
cattggaattcctatggccatccaactccaattgacctcaatggagcagcataccaaaat
ccaagggatcagttcacttcatatcaagtccacaatgggaacgcagatgtgcacaagacg
acctcatctgatcctcctgaattatctaccgatgatctacagaaaattcaggttgattgc
ttagcagctatagctatacaacttcttttgaagctcaagagatacttaaaagtcacgtac
agcttaattgatgaccggtgccaagcctattctccaacggaaccattgaagttaggagat
cctctgtccaaacaaaacattgcctttgatctcagcgaaactcgcaccgacttaccttca
acatatccagacttagttcagagatatcaggagtttaagaacgcaatgagagaagataca
gttgacttcaccatctattcagcaagcttcaagagaaaacgcccaacgccaagaaaaact
tcaagatctgctaaaaaagcagtggcctacaatgaagatgatgaagatgacgacgaagat
gacaaaggatggcatggaggaggtggaagaggagcttctcggagactgagttacagcacc
agaagtagcaacagaagataa

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