Camelina sativa (false flax): 104735572
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Entry
104735572 CDS
T05044
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104735572
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104735572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_2
zf-RING_15
PHD-1st_NSD
PHD_4
Motif
Other DBs
NCBI-GeneID:
104735572
NCBI-ProteinID:
XP_019090431
LinkDB
All DBs
Position
13:complement(6643800..6654804)
Genome browser
AA seq
1846 aa
AA seq
DB search
MSNQSSSGWGSTSTSTQFGIGLANTVQSEAAPNLPLPSLPLFCGAAEPGEFKLFDEVAQR
SGYRSLDRSEILAQSSRIANMLHETDVSYLDLRNEAVALNCNSVEHSQLYDQVLRCNPGA
FEYVIPGPTCDSVFTNEEPQKIISEPSVPVQIQRQTDNHLARNIQPEPVKRVFPSNHLED
HSLQHEPLTNQSPKDVTAYHDSRPETSTMNEISASKKPKGKKKRKDDSFSVQPDPSVLQE
SIVTSFCEMLEDFCGRAEVSGDDRDEAEWLPVPVDEVRVLVNELMSIRSKMLLHMVPVDI
LSRLLHTLDHQIHRAEGLSIYSEHADSDSVLLVLGALESIHASLAVMANSDMPKQLYKEE
IIERILEFSRHQMMAVMSAYDPSYRTASKPVENVAFEGDDDDDHDHDMGSASKRRRIGKI
GKVKKSAVNRISGAVNTAQQKLCTILGLLKDLLLVERLSDSCILQLLKTSITTFLVENIQ
LLQLKSISLIGGIYNSYAQHRTYVIDEISQLLWKLPSSKRALRAYLLPDEEQRQIQMVTA
LLIQLVHNSTSLPETSRQASSGNSILDIPVDVGYLTKCHEAATETCCLFWTRVLERFASF
KGQDASEIKLIIENLVIDLLTALNIPEYPSVSPILEVLCVILLHNAGLKSKDISARLMAI
DLLGTIAARLKRDAVLCSKEIFWTSLESDSETSVDQVCAKDCAVCLGKTAGSLLVCQICQ
RRFHADCLGLKELDIPSRNWHCPFCVCKRQLLVLQSYCKTDTKSTGKLESEENIGNLNMI
TKTEVVQQMLLNYLQDAGSVDDVHTFICWFYLCLWYKDVPKSQKKFKYYIARLKAKSIIR
NSGATNSFLTRDAIKKITLALGLNNSFSRGFDKILHMLLASLRESAPNIRAKALRAVSII
VEADPEVLCDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGIKYFEKVAERIKD
TGVSVRKRAIKIIRDMCTSNPNFSEFTSACAEILSRISDDESSVQDLVCKTFYEFWFEEP
PGHHTQFASDASSIPVELEKKTKQMVGLLSRTPNHQLLVTIIKRALALDFFPQAAKAAGI
NPVALASVRRRCELMCKCLLEKILQVEEMSREEGEVQVLPYVLVLHAFCLVDPGLCTPAS
DPTKFVITLQPYMKSQGDSRTGAQLLESILFIIDSVLPLIRKLPLSVTEDLEQDLKHMIV
RHSFLTVVHACVRCLCSVSKLAGKGVSIVEHLLQFFFKRLEAQGSDNTQIAGRSLFCLGL
LIRHGNTLISTSGGKIFNLSGCLNLFKRHLQTEDLALKVRSLQALGFILIARPEYMLEED
IGKIIESTLSDEANGRMKMQSLQNMYEYLLDAEKQLGSEKASDNIVKTIEQGGHAVPVAA
GAGDTNICGGIVQLYWDKILGRCLDFDDQIRQTALKIVEVVLRQGLVHPITCVPYLIALE
TDPQEANQKLAHHLLMNMHEKYPAFFESRLGDGLQMSFIFMQSISQVTSEPNQSLQQKRS
TNMSGKNDHTNSTLTQARLGVSRIYKLIRGNRISRNKFMTSIVRKFDNPTWSESVISFLK
YCTETLALLPFTSPDEPLYLVYSINRVMQIRAGAVESNLKASLHKDSTKTQHGNGTYQQH
SLPGHMHMMDLNTRIQDEPMHWNSYGHPTPIDLNGAAYQNPRDQFTSYQVHNGNADVHKT
TSSDPPELSTDDLQKIQVDCLAAIAIQLLLKLKRYLKVTYSLIDDRCQAYSPTEPLKLGD
PLSKQNIAFDLSETRTDLPSTYPDLVQRYQEFKNAMREDTVDFTIYSASFKRKRPTPRKT
SRSAKKAVAYNEDDEDDDEDDKGWHGGGGRGASRRLSYSTRSSNRR
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaaagcagttccggctggggttcgacttcgacttcgactcagttcgggatt
ggtttggctaatactgttcagtccgaggctgctcctaacttgccgctaccgtcgttacct
ttattctgcggtgccgctgagcctggggagttcaagctcttcgatgaggttgcccaacgt
agtggttacaggtcgttggatcgcagtgagattctagcgcaatccagtagaatcgcaaac
atgcttcacgagactgacgtttcttatctggatcttcgaaacgaagctgtggctcttaat
tgtaattctgtggagcattctcagttatacgatcaagttctacgatgcaatcctggagca
tttgagtatgttatccccggtccgacctgcgattcagtctttaccaatgaagagcctcaa
aagataatttctgagccaagtgttcctgtccagattcaacggcagacggataatcattta
gctaggaatatacaacctgaacctgtgaaaagggtattcccatcaaatcatcttgaagat
catagtttgcagcacgaacctttgacaaaccagtcaccgaaagatgttaccgcgtatcat
gactctcggcctgaaacgagtaccatgaatgaaatttctgcttccaagaagccaaaggga
aagaagaaacgtaaagatgactcgttttcagttcaaccagatccatctgtgctgcaagag
tccattgtaacaagcttttgtgagatgttagaagacttctgtggcagagctgaagtctct
ggtgatgatagggatgaagcagagtggttaccagtgcctgttgatgaagtccgtgttctt
gtaaatgaattgatgtctatacggtcgaaaatgcttctgcatatggtacctgttgatatt
ctatcgaggttattgcacactctggatcatcagatacacagggcagaaggcttgtccatt
tatagtgaacatgcagattcagattcagtgttattggttcttggtgcccttgagtcaatc
catgcatcacttgcagtgatggccaacagtgatatgccaaagcagctctacaaggaggag
ataattgagagaattctggagttttctaggcaccaaatgatggctgttatgtctgcttat
gatccatcataccgtactgcaagtaaaccggtagaaaatgttgcatttgaaggtgatgat
gatgatgatcacgatcatgacatgggctcagccagcaaaaggcggcgcataggaaagatc
ggcaaagtgaagaagtcggcagtgaacaggatctctggagcagtgaatactgcacaacag
aaactttgcactattcttggcttactcaaggacctgttgttggtagaaaggttgtctgac
agttgcattttacaattgttgaagacaagtattacgacatttctggtggaaaacatccaa
cttctacaacttaaatcaattagcttaatcggtggtatatacaattcatatgctcaacac
cgaacgtatgtgatagatgaaatatctcaattactatggaagttaccttcctcgaaacga
gcattgagagcgtatcttctccctgatgaagaacagaggcagattcaaatggtcactgct
ttgcttattcagttggttcacaacagcacaagccttcctgaaacctcgagacaggcttcg
agtggaaactccatactggatatcccagttgatgttggctacctaactaaatgtcatgaa
gcggctacagaaacatgttgcctcttctggactcgtgtccttgaacgatttgccagtttt
aagggtcaggatgcttcagagatcaaattgattattgagaatcttgttatagatttactg
acagcattgaatattcctgaatatccatccgtgtctcctatccttgaggttctctgtgtc
atactgctgcataatgcagggttgaaatcaaaagatatctctgctcgattaatggccatt
gacttgttgggtacaattgctgcaaggttaaaacgtgatgctgtcctctgcagtaaagaa
attttctggacgtcactagaatctgatagtgaaactagcgtcgaccaagtttgcgcaaaa
gattgcgctgtttgtttaggtaaaacggccgggagcttattggtctgtcaaatctgtcaa
aggcggtttcatgctgactgtttgggtttaaaggaactagacattccaagtcgaaattgg
cactgtccgttttgcgtgtgcaagaggcaacttcttgtactacagtcttactgcaagaca
gacacaaagagtactggtaagttggaatcagaagaaaacatcggaaacttaaatatgatc
acgaagactgaagttgtgcaacagatgctcttgaattaccttcaggatgcaggatctgtt
gatgatgtgcatactttcatttgctggttttatctgtgcctttggtataaagatgtcccg
aaatctcagaagaaattcaaatattacatcgccagactgaaagcaaagtcaataatccgt
aactctggagcaactaattcgttcttgacaagagatgctatcaagaagattactttagcg
cttgggctaaataattccttttccagaggatttgataagattctacacatgcttctggct
agtttaagagagagcgctcccaatattagggccaaagctttgcgagcagttagtataatt
gttgaagctgatccagaggtactttgtgataagcgtgttcagttggctgttgaaggaagg
ttttgtgattctgcaatatctgttagagaagcagcactggaacttgttggcaggcatatt
gcatcacatcctgatgttggtataaagtactttgagaaggttgctgagaggattaaagat
actggagtgagtgttcgaaaacgagccatcaagataatacgtgacatgtgtacttcaaat
cccaacttctctgaatttacaagtgcgtgcgcggagatattatctcgtatcagtgatgat
gagtctagcgttcaggatcttgtgtgcaaaactttctatgaattttggtttgaggaacct
ccagggcatcatactcagtttgctagtgatgctagctccattccagtggaactggaaaag
aaaaccaaacaaatggttgggttgttaagcaggaccccaaaccaccagcttcttgtgaca
attattaagcgtgccttggctttggattttttccctcaagcagctaaagctgctggtatt
aacccagttgctcttgcatcagtacgcaggcgttgcgagttgatgtgcaagtgcttactg
gaaaaaatattacaggtcgaagaaatgagccgcgaagaaggagaggtgcaagtacttcct
tatgtacttgttttgcatgctttttgtctggtggatcctggtctgtgtacaccggcctca
gaccctactaagtttgtcatcaccctacagccatatatgaagagtcagggtgatagtcga
actggagcacaattactagagagtattcttttcattatcgattctgtcctacccttgatc
cgcaagctgcctttaagtgtcacagaagatctagaacaagatctaaagcatatgattgtt
cgacattcgtttctaactgttgttcatgcatgtgttaggtgtctctgttctgtgagtaaa
ttggcgggaaaaggtgttagcatagttgagcatcttcttcagttcttttttaagcggctg
gaggcccaaggttccgataacacacagattgctgggcggtccctcttttgtcttggctta
cttatccgccatggaaacactcttattagcacctcgggtggcaagattttcaatctctct
ggctgtcttaatttatttaaacgacacctccaaacagaagatcttgctttgaaagtcagg
tcgttgcaggctttaggattcatcctaattgcacgacctgagtacatgttggaagaagac
attggaaaaataatcgagagtacattatcagatgaagcaaacgggcgtatgaagatgcaa
tcattacaaaatatgtatgaataccttcttgatgcggaaaaacaattgggatccgagaaa
gccagtgataacatagttaaaacaattgagcaaggtggccatgcagtacccgtggccgct
ggtgcaggtgacaccaacatttgcggaggcattgtgcagttgtattgggataagatatta
ggtagatgcttggactttgatgatcaaattcgccagactgctctcaagatagtggaagtt
gtactacgtcaaggtctagttcatcctattacgtgtgttccttatttgatcgccctcgag
acagatcctcaagaggccaaccaaaagctggcccatcatttactaatgaatatgcatgag
aagtatccggcattttttgagagccgtctcggtgacggactccaaatgtcgttcatcttc
atgcaatccatcagccaggtcacttcagaaccaaatcaaagtcttcagcaaaagagatcg
acaaacatgtcggggaaaaatgatcatactaatagtactctcacacaagctagacttggc
gtctctaggatctacaagcttatccgtggaaaccggatttctcgaaacaaatttatgact
tcgattgttcgcaagtttgataatccaacctggagtgaatcagtaatatcatttctgaag
tattgcactgaaacccttgctttacttccattcacatcacctgatgagccgctctatctt
gtatattccataaaccgagtaatgcaaattcgagctggtgcagtcgagtcaaatttgaag
gcttcgttacataaagattccacaaagactcagcacggaaatggaacataccaacaacat
tcgcttcccggacatatgcacatgatggatctaaacactagaatccaagatgaaccgatg
cattggaattcctatggccatccaactccaattgacctcaatggagcagcataccaaaat
ccaagggatcagttcacttcatatcaagtccacaatgggaacgcagatgtgcacaagacg
acctcatctgatcctcctgaattatctaccgatgatctacagaaaattcaggttgattgc
ttagcagctatagctatacaacttcttttgaagctcaagagatacttaaaagtcacgtac
agcttaattgatgaccggtgccaagcctattctccaacggaaccattgaagttaggagat
cctctgtccaaacaaaacattgcctttgatctcagcgaaactcgcaccgacttaccttca
acatatccagacttagttcagagatatcaggagtttaagaacgcaatgagagaagataca
gttgacttcaccatctattcagcaagcttcaagagaaaacgcccaacgccaagaaaaact
tcaagatctgctaaaaaagcagtggcctacaatgaagatgatgaagatgacgacgaagat
gacaaaggatggcatggaggaggtggaagaggagcttctcggagactgagttacagcacc
agaagtagcaacagaagataa
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integrated database retrieval system