KEGG   Camelina sativa (false flax): 104735696
Entry
104735696         CDS       T05044                                 
Name
(RefSeq) DNA repair protein RAD4-like
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
csat  Camelina sativa (false flax)
Pathway
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    104735696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csat03400]
    104735696
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      104735696
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 104735696
NCBI-ProteinID: XP_010453826
LinkDB
Position
13:7123098..7127756
AA seq 868 aa
MKSTSDSKDGRLSAASRAAVNKILDRRTSRGKKKQDDNFDSSKRDKSVNDKGKQAVKTTL
TDNVLEDRECVTIVLSDDDEMNDSDWEDCPIPILDNTVDANVDDTRELTIEFDDDVPDAK
KQKNAYRATAKDKERAELVHKVHLLCLLARGRIVDNACNDPLIQAALLSLLPSYLSKVAN
IEKVTVRDVAPLLRWVRENFSVRCTPSSEKTFRTSLAFALESRKGTAEELAALSVALFRA
LKLTTRFVSILDVASLKPGADKDESSGQNRGKMKHGVFRTSTLMVPKQQAISSYPNKSSS
HVEDKSLCETSEPQHRNSLGSDQLQHDTVNSSCEAGTSSKSGGTKRKGDVEYEMQIAMAL
SATADNQQRSKVNGKTKIRKITKVIDGPSVSNQVISTAIGSKKVDSPLCWAEVFCNGENM
DGKWVHVDAVNGVIDAAQNVEATTTACKTSLRYVVAFAGGGAKDVTRRYCTKWHTISSKR
VCSVWWDMVLAPLIHLESAATHNEDIALRNFNSLNPVANRVSLSSSSYGIRSALEDMELA
TRSLTEPLPTNQQAYKSHELYAIEKWLHKNQILHPKGPVLGFCNGHPVYPRTCVQTLKTK
ERWLRDGLQLKANEVPSKILKRNSKFKKVKDFGDGDGNIGGGSYLMELYGKWQMEPLCLP
HAVNGIVPKNERGQVDVWSEKCLPPGTVHLKLPRIFSVAKRFGIDYAPAMVGFEYRSGGA
TPIFQGIVVCTEFKDTILEAYAEEQEKREEEERRRNEAQAASRWYQLLSSILTRERLKNR
YANNSNSVETKSLEVNSVPIIKPKNVKSPENQRVAKTGGGGRSRVRKTRNEDESHEHVFL
EDQETFDEETSVKTKRCKCGFSVEVEQM
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgaagtctacaagtgatagtaaggacggtagactctcagcagcctctagagctgcagtc
aacaaaattcttgacagaagaacttctcgaggcaagaagaagcaagatgacaactttgat
tcctcaaagcgggataaaagtgtaaatgacaaggggaagcaagccgttaagacaacttta
actgataacgttctagaggacagggaatgtgttacgattgtactctcggatgatgatgaa
atgaatgattcagactgggaagactgtccaattcctattcttgataacacggttgatgct
aatgttgatgacactagagagttaaccatagaatttgatgatgatgttcctgatgctaag
aagcagaagaatgcataccgtgcaacagcaaaagacaaggaacgggcggaacttgtacat
aaggttcacttgctctgtctgctcgcaagagggaggatagttgacaatgcttgtaatgat
cccttgattcaggctgccttgctttcacttctgccatcatacttatcaaaagtagcgaat
atcgagaaagttactgtcagggatgtagcccctcttcttcgttgggttcgtgaaaacttt
tccgttaggtgtactcccagttctgagaaaacttttcgtacttccctagcatttgctctt
gaatctcgtaaaggcacagctgaagagcttgcagcactgtctgttgctttgtttagagca
ttaaagctcacaactcggtttgtgtctattcttgatgttgcatccttaaaaccaggggcc
gataaggacgaatcatcaggtcaaaaccgaggtaaaatgaagcatggggtattcaggacc
tcaacgcttatggtaccaaaacagcaggccatctcgtcatacccaaataaatcttcttcc
catgttgaggataaaagtctctgtgaaacgtcggagcctcagcataggaactccctggga
tctgatcagttgcaacacgatacagtcaattcatcttgcgaagcaggaacgtctagtaaa
tctggcggaacaaagaggaaaggagatgttgagtacgagatgcaaatagccatggctttg
agtgcaactgcagacaaccaacagcgctctaaagtgaacgggaaaacgaaaattcgtaaa
ataacaaaagtaattgatggcccttcagtttctaaccaagtaatatccacggctatcggt
tctaagaaagtagattctcccctttgttgggctgaggtgttctgcaatggggaaaacatg
gatgggaaatgggtccatgtggatgctgttaatggagtgatagatgcagcgcaaaacgtt
gaagctacaactaccgcttgcaaaacctctcttagatatgttgtcgcttttgctggtggt
ggagccaaagatgtcactcgcaggtactgtacaaaatggcacactatttcatccaaaagg
gtgtgttcagtgtggtgggatatggtattagcaccgttaatacatctagagtcagccgca
actcacaatgaagacattgctctgagaaatttcaatagtctaaatcctgttgctaacaga
gtttccttgagtagctcttcctatggtataaggagtgctcttgaagatatggagttggct
acgcggtcgttgactgagccgcttcctactaaccaacaggcctataaaagccacgaactc
tatgctattgagaaatggcttcacaagaaccagatacttcacccaaaaggtccagttctg
ggattttgcaatggtcatccagtatatcctcgaacctgtgtgcagactcttaaaacaaaa
gaaagatggctccgtgatgggctacaacttaaggcgaatgaagttccctcaaagattctg
aagcggaactcgaagttcaagaaagtaaaagattttggagatggcgacggtaacatcgga
ggtggttcttatttgatggaactatatgggaagtggcaaatggaaccattgtgtctccct
cacgctgttaatggaattgtgcccaagaacgagcgcggtcaagttgatgtctggtctgag
aaatgcctcccacctggaacagtccacctaaagcttcctagaatattttcggttgctaag
agatttggtatagattatgcacctgccatggttggtttcgagtacagaagtggaggtgct
actcctatttttcaaggtattgtggtctgtaccgagttcaaagacacaatcctcgaggca
tatgcagaagaacaagaaaaaagagaagaagaggagagaagaagaaatgaagcacaagca
gcttcaagatggtatcagcttctttcgtcgatcttaacccgtgaaagattgaaaaaccgt
tacgctaataactccaacagtgtcgaaacgaagagtttggaagtgaattcagtgcccatc
attaagccgaagaatgtgaaatcacctgaaaatcagagagtggctaagactggaggagga
ggaaggtcacgagtaagaaagactcgtaatgaagacgaaagccatgagcatgtgtttctt
gaggaccaagaaacctttgatgaggaaacctctgtgaaaacaaaacgctgcaaatgcggc
ttttctgtcgaagttgaacaaatgtag

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