Camelina sativa (false flax): 104735696
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Entry
104735696 CDS
T05044
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104735696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104735696
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104735696
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
104735696
NCBI-ProteinID:
XP_010453826
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Position
13:7123098..7127756
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AA seq
868 aa
AA seq
DB search
MKSTSDSKDGRLSAASRAAVNKILDRRTSRGKKKQDDNFDSSKRDKSVNDKGKQAVKTTL
TDNVLEDRECVTIVLSDDDEMNDSDWEDCPIPILDNTVDANVDDTRELTIEFDDDVPDAK
KQKNAYRATAKDKERAELVHKVHLLCLLARGRIVDNACNDPLIQAALLSLLPSYLSKVAN
IEKVTVRDVAPLLRWVRENFSVRCTPSSEKTFRTSLAFALESRKGTAEELAALSVALFRA
LKLTTRFVSILDVASLKPGADKDESSGQNRGKMKHGVFRTSTLMVPKQQAISSYPNKSSS
HVEDKSLCETSEPQHRNSLGSDQLQHDTVNSSCEAGTSSKSGGTKRKGDVEYEMQIAMAL
SATADNQQRSKVNGKTKIRKITKVIDGPSVSNQVISTAIGSKKVDSPLCWAEVFCNGENM
DGKWVHVDAVNGVIDAAQNVEATTTACKTSLRYVVAFAGGGAKDVTRRYCTKWHTISSKR
VCSVWWDMVLAPLIHLESAATHNEDIALRNFNSLNPVANRVSLSSSSYGIRSALEDMELA
TRSLTEPLPTNQQAYKSHELYAIEKWLHKNQILHPKGPVLGFCNGHPVYPRTCVQTLKTK
ERWLRDGLQLKANEVPSKILKRNSKFKKVKDFGDGDGNIGGGSYLMELYGKWQMEPLCLP
HAVNGIVPKNERGQVDVWSEKCLPPGTVHLKLPRIFSVAKRFGIDYAPAMVGFEYRSGGA
TPIFQGIVVCTEFKDTILEAYAEEQEKREEEERRRNEAQAASRWYQLLSSILTRERLKNR
YANNSNSVETKSLEVNSVPIIKPKNVKSPENQRVAKTGGGGRSRVRKTRNEDESHEHVFL
EDQETFDEETSVKTKRCKCGFSVEVEQM
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctacaagtgatagtaaggacggtagactctcagcagcctctagagctgcagtc
aacaaaattcttgacagaagaacttctcgaggcaagaagaagcaagatgacaactttgat
tcctcaaagcgggataaaagtgtaaatgacaaggggaagcaagccgttaagacaacttta
actgataacgttctagaggacagggaatgtgttacgattgtactctcggatgatgatgaa
atgaatgattcagactgggaagactgtccaattcctattcttgataacacggttgatgct
aatgttgatgacactagagagttaaccatagaatttgatgatgatgttcctgatgctaag
aagcagaagaatgcataccgtgcaacagcaaaagacaaggaacgggcggaacttgtacat
aaggttcacttgctctgtctgctcgcaagagggaggatagttgacaatgcttgtaatgat
cccttgattcaggctgccttgctttcacttctgccatcatacttatcaaaagtagcgaat
atcgagaaagttactgtcagggatgtagcccctcttcttcgttgggttcgtgaaaacttt
tccgttaggtgtactcccagttctgagaaaacttttcgtacttccctagcatttgctctt
gaatctcgtaaaggcacagctgaagagcttgcagcactgtctgttgctttgtttagagca
ttaaagctcacaactcggtttgtgtctattcttgatgttgcatccttaaaaccaggggcc
gataaggacgaatcatcaggtcaaaaccgaggtaaaatgaagcatggggtattcaggacc
tcaacgcttatggtaccaaaacagcaggccatctcgtcatacccaaataaatcttcttcc
catgttgaggataaaagtctctgtgaaacgtcggagcctcagcataggaactccctggga
tctgatcagttgcaacacgatacagtcaattcatcttgcgaagcaggaacgtctagtaaa
tctggcggaacaaagaggaaaggagatgttgagtacgagatgcaaatagccatggctttg
agtgcaactgcagacaaccaacagcgctctaaagtgaacgggaaaacgaaaattcgtaaa
ataacaaaagtaattgatggcccttcagtttctaaccaagtaatatccacggctatcggt
tctaagaaagtagattctcccctttgttgggctgaggtgttctgcaatggggaaaacatg
gatgggaaatgggtccatgtggatgctgttaatggagtgatagatgcagcgcaaaacgtt
gaagctacaactaccgcttgcaaaacctctcttagatatgttgtcgcttttgctggtggt
ggagccaaagatgtcactcgcaggtactgtacaaaatggcacactatttcatccaaaagg
gtgtgttcagtgtggtgggatatggtattagcaccgttaatacatctagagtcagccgca
actcacaatgaagacattgctctgagaaatttcaatagtctaaatcctgttgctaacaga
gtttccttgagtagctcttcctatggtataaggagtgctcttgaagatatggagttggct
acgcggtcgttgactgagccgcttcctactaaccaacaggcctataaaagccacgaactc
tatgctattgagaaatggcttcacaagaaccagatacttcacccaaaaggtccagttctg
ggattttgcaatggtcatccagtatatcctcgaacctgtgtgcagactcttaaaacaaaa
gaaagatggctccgtgatgggctacaacttaaggcgaatgaagttccctcaaagattctg
aagcggaactcgaagttcaagaaagtaaaagattttggagatggcgacggtaacatcgga
ggtggttcttatttgatggaactatatgggaagtggcaaatggaaccattgtgtctccct
cacgctgttaatggaattgtgcccaagaacgagcgcggtcaagttgatgtctggtctgag
aaatgcctcccacctggaacagtccacctaaagcttcctagaatattttcggttgctaag
agatttggtatagattatgcacctgccatggttggtttcgagtacagaagtggaggtgct
actcctatttttcaaggtattgtggtctgtaccgagttcaaagacacaatcctcgaggca
tatgcagaagaacaagaaaaaagagaagaagaggagagaagaagaaatgaagcacaagca
gcttcaagatggtatcagcttctttcgtcgatcttaacccgtgaaagattgaaaaaccgt
tacgctaataactccaacagtgtcgaaacgaagagtttggaagtgaattcagtgcccatc
attaagccgaagaatgtgaaatcacctgaaaatcagagagtggctaagactggaggagga
ggaaggtcacgagtaagaaagactcgtaatgaagacgaaagccatgagcatgtgtttctt
gaggaccaagaaacctttgatgaggaaacctctgtgaaaacaaaacgctgcaaatgcggc
ttttctgtcgaagttgaacaaatgtag
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