Camelina sativa (false flax): 104735939
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Entry
104735939 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104735939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104735939
03110 Chaperones and folding catalysts [BR:
csat03110
]
104735939
03029 Mitochondrial biogenesis [BR:
csat03029
]
104735939
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104735939
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104735939
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104735939
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104735939
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104735939
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104735939
Exosomal proteins of other body fluids (saliva and urine)
104735939
Exosomal proteins of breast cancer cells
104735939
Exosomal proteins of colorectal cancer cells
104735939
Exosomal proteins of bladder cancer cells
104735939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104735939
NCBI-ProteinID:
XP_010454133
UniProt:
A0ABM0VCG2
LinkDB
All DBs
Position
13:8202879..8205840
Genome browser
AA seq
576 aa
AA seq
DB search
MFAAVSPSSFSPTIIPPSRSGQRNNPRKFSVVRAGSKRILYGKDSREALQAGIDKLADAV
SGTLGPRGRNVVLAEKDTIKVINDGVTIAKSIELPDTIENAGATLIQEVAVKMNESAGDG
TTTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLMMRSVPVKGKSDVKAVA
SISAGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMKFDKGYMSPHFITNQ
EKSTVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVLEILVVNKKQ
GLINVAVVKCPGMLDGKKALLQDIALMTGADYLSGDLGMSLMGATSDQLGVSRRVIITAN
STTIVADDSTKPEIQARIAQMKKDLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETE
LEDRKLRIEDAKNATFAAMREGIVPGGGATYIHLLDEIPIIKKDILEDSYEQIGADIVAT
ALTAPAMAIATNAGVDGLVVVEKTRELEWRSGYNAMSGRYEDLLNSGIADPCRVSRFALQ
NAVSVAGIVLTTQAVLVEKIKQPKPAVPQVPGIPTT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgccgtatcaccgtcgtctttctcgccgacaatcattcctcctagccgtagt
ggtcagaggaacaacccgagaaaattctcggtggtgagagcaggatccaagaggatactc
tacggcaaagatagcagagaagcactacaagccggtattgataagttagctgatgctgtt
tctggtactttaggtcctagagggcgtaacgtagtgctagctgaaaaagacacaatcaaa
gttattaacgatggtgttaccattgctaaatctattgagcttcctgatacgattgagaac
gctggagcaacgttaatccaagaggttgcggttaagatgaatgagtcagcgggtgatggg
actacaactgcaattattttggctagagaaatgatcaaagctggatctttggctattgct
tttggagctaatgctgtttctgtgaagaatggaatgaacaagactgttaaagagttggtc
agggtgttgatgatgagaagtgttcctgtcaaagggaagagtgatgttaaagccgtggct
tcaatctctgctggcaacgatgaatttgtggggaacttgattgctgaaactgtggaaaag
attggccctgatggcgtcatctccattgaatcatcttccacatcagaaacgtctgttata
gttgaggaagggatgaagtttgacaagggctatatgtcacctcatttcatcacaaaccag
gagaaatctactgtggaattcgacaaagctaaaatccttgtgacggatcagaaaattact
tcagccaaggaattagttccgttactggagaaaacttcacaactgagtgttccactcctt
ataattgcagaagatatatccgcggaagtgcttgagatactggtggtgaacaagaagcaa
ggtttgattaatgttgctgttgtgaaatgtccaggaatgttggatgggaaaaaggctttg
ctacaagacattgcactcatgacaggagctgattatctttccggagatttaggcatgtct
ctcatgggtgcaacttcagatcagctgggtgtttctcggagagtaataattacagctaat
tcgacaactatagtcgcagacgattcaactaaaccggagattcaggcaagaattgctcag
atgaagaaggatctagctgagacagataattcatatctttcaaaaaagatcgcagagaga
attgctaagctcacaggaggcgtggctgtaataaaggtgggaggtcacactgaaacagaa
cttgaggacagaaaacttagaatagaggacgcgaagaacgctacatttgcagccatgaga
gaaggtatagttccaggtggtggtgccacttatattcatcttttagatgagatcccgata
atcaagaaggatatactggaagattcatacgaacagataggtgcagacattgtagcgacg
gcgctcacagcacctgcaatggccatagcaaccaatgccggggttgatggattagttgta
gtggagaaaaccagagagctcgaatggagaagtggttacaacgcaatgtctggaaggtat
gaagatcttctgaactctggaatagcagatccttgtcgggtttcaagattcgccctccaa
aatgcggtttctgttgccgggatagttctcacgactcaagctgtgctagtggagaaaatc
aaacagcctaaacctgccgttcctcaagttccaggcatacctaccacataa
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