Camelina sativa (false flax): 104736212
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Entry
104736212 CDS
T05044
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03410
Base excision repair
csat03420
Nucleotide excision repair
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104736212
03410 Base excision repair
104736212
03420 Nucleotide excision repair
104736212
03430 Mismatch repair
104736212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104736212
03400 DNA repair and recombination proteins [BR:
csat03400
]
104736212
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104736212
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104736212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA_lid_RFC1
AAA
AAA_22
PTCB-BRCT
AAA_19
AAA_30
RCF1-5-like_lid
Rad17
AAA_18
AAA_assoc_2
AAA_5
nSTAND3
BRCT_2
RuvB_N
AAA_28
Gp44_lid
AAA_17
Zeta_toxin
AAA_14
NTPase_1
AAA_2
Sigma54_activ_2
AAA_24
TsaE
RNA_helicase
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
104736212
NCBI-ProteinID:
XP_010454462
UniProt:
A0ABM0VDA1
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All DBs
Position
13:complement(9667981..9675186)
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AA seq
956 aa
AA seq
DB search
MSDIRKWFMKAHEKGNGSAPKSTSSKTGAVKSAAETAPIKSEQASGDLETAARRKTSKYF
GKEKTIVKDEKEVEELPAKRKLKTESDDLSKSRPRKVTKVDDDDDDFDVPIPRKTRDSTP
SKKLKSGSGRGIATKTVDKDEDDDGEDAQEKETPLKSGGRGRGGRAASGASTGGRGRGGG
RGGFMNFGERKDPPHKGEKEVPEGTPDCLAGSTFVISGTLDSLEREEAEDLIKRHGGRIT
GSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPIKKSLPERTNKGTE
KVCAPPKTSPQKEVTRGKPLAKSSPNKVPPAKGKKKIIETSLPWTEKYRPKVPNEIVGNQ
SLVTQIHNWLSHWHDQFGGTGSKGKGKKVNDAGAKKAILLSGTPGIGKTTSAKLVSQMLG
FQTVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMAANMDRSKHPKTVLIMDEVD
GMSAGDRGGVADLIASIKISKIPIICICNDKYSQKLKSLVNYCLPLNFRKPTKQQMGKRL
MHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSTIKYDDIRQRLLSSAKDE
DISPFSAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLIIQENYLNYRPSGKDEAKRMELL
ARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVFEQGERNFNRFGG
WLGKNSTAGKNRRLMEDLHVHVLASRESSSGRETLRVDYLPLLMNRLTSPLQTLPKDEAV
SEVVDFMNSYSISQEDFDTIMELGKFKGRANPMDGVPPPVKAALTRKYNELNKTRMVRVA
DMVQLPGMKKAPKKRIAAMLEPTVDSLGDEDGEPLAENEEENASDAEEDSEEANDGEKLE
SNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGKAADASAEKKATGRGSGTKRKR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaggaagtggtttatgaaagcccatgaaaagggaaacggaagtgctccg
aaatcgacctcttccaagacaggtgctgtgaagagtgctgcagagactgcacccataaaa
tcagagcaggctagtggagacctggaaactgctgctagaagaaaaacgagcaagtatttt
ggtaaagaaaaaacaatagttaaagatgagaaagaggtggaagaattacctgccaagagg
aaacttaagactgagtccgatgatttaagcaagtcccgtccaagaaaagttaccaaggtt
gatgatgacgatgacgattttgatgtacctattccaaggaagactcgtgatagcactccc
agcaaaaaactaaagtcggggtcaggtagaggaatcgcaactaaaactgttgataaagac
gaggatgatgatggtgaagatgcccaagaaaaggagactcctctgaaatcaggtggaaga
ggccgtggcggtagagctgcatcaggggcatcaactggtggaagaggtagaggtggaggg
cgaggtgggtttatgaattttggtgaaaggaaagacccaccgcataaaggagaaaaggag
gttcctgaaggcacccctgattgcttagctggatcgacatttgtaattagtggaacactt
gatagtttagaaagagaagaagcagaagatcttataaagcggcatggtggtcgtattaca
ggctctgttagcaagaaaacgacgtaccttttgtgtgatgaagatatcggcggaaggaaa
tctgaaaaagctaaagagctgggcactaagttccttacagaggatggcctatttgacatg
atccggtcctcgaaacccataaaaaagtctctgcctgaaaggactaacaaaggcactgaa
aaagtctgtgcaccaccgaagacaagccctcagaaagaagtgacaagaggaaagccttta
gcaaaaagttcgcccaacaaggttcccccagcgaaaggaaaaaagaaaattattgagact
tccttgccatggacggaaaaatacagaccgaaggttccaaatgagattgttgggaatcag
tcactggtaactcagattcacaactggctgtcccactggcatgatcaatttggaggtact
ggaagtaaaggaaaggggaagaaagtgaatgatgctggtgccaagaaggctatacttttg
agcggaacacctggtattggaaaaacaacatcagcaaagttggttagtcagatgcttggt
ttccagacagttgaggttaatgctagtgacagtcgtggaaaggcgaactcgaatatcgcc
aaaggtattggtggtagtaatgctaatactgtgaaggaacttgtcaataacgaagccatg
gccgctaacatggataggtcaaagcacccgaagactgttctaatcatggatgaagtagat
ggaatgtctgcaggcgacaggggaggtgttgccgatcttattgctagcattaaaatatca
aagattcctatcatctgcatttgtaatgacaaatatagtcagaaactgaagagtttagta
aactactgtcttcccctcaatttccggaagcccacgaaacagcagatgggaaaaaggctg
atgcatattgctaaagcagaaggccttgaagttaatgaaattgccctggaagaactcgct
gagagagtaaatggtgacatacgattggccctaaatcagctccaatatatgagcctgtcc
atgtcaaccatcaagtatgatgatatcaggcaacgcctgctaagcagtgctaaggatgaa
gatatttcccctttctcagctgttgacaagttgtttagttataatggtgggaagctgaga
atggatgaacggattgacctaagcatgagtgatcctgatttggttcctctaattatacag
gaaaactatctcaattataggccatcaggtaaagatgaggcaaaacgaatggagttactt
gctcgtgctgcggaatctattgcggatggagatattatcaacgtgcagattcgaagatac
aggcaatggcaactttctcagtcatgctgtgttgcatcttctattctcccagcttcgttg
ttgcatggatcaagggaggtattcgagcagggtgagcgtaatttcaacagatttggtggg
tggcttggcaagaattcaacggcgggaaaaaatagacggttaatggaggatctgcatgtt
catgtccttgcttcccgtgaatccagctctggaagggagactcttcgtgttgattatctt
cccctgctcatgaatcgcttgactagcccacttcagacgctgcctaaggatgaagctgtt
tcagaagttgttgatttcatgaactcctactctataagtcaggaggacttcgatactatt
atggagttgggaaaatttaaggggcgtgcaaatccgatggatggtgttccacctccagtt
aaagcagctttgaccagaaaatataatgagttgaataaaaccagaatggtacgtgttgct
gacatggtgcaacttccgggaatgaaaaaggcccctaagaagcgaatagctgcaatgctg
gaaccaactgttgatagtttgggagatgaggatggcgagccattagcagaaaatgaagaa
gaaaatgcatcagacgctgaagaagactcagaagaagcaaacgatggagaaaagctagag
tcgaatctaaaaaatctgaatgctagagggatccaagttgaattggatttgaagggagct
gggagctctggttcaagaaaagcagctggtaaaggcagaggcaaagcagccgatgcgtct
gctgagaagaaagctacagggagaggctctggtaccaagagaaagagatga
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