Entry |
|
Name |
(RefSeq) replication factor C subunit 1
|
KO |
K10754 | replication factor C subunit 1 |
|
Organism |
csat Camelina sativa (false flax)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104736212
03410 Base excision repair
104736212
03420 Nucleotide excision repair
104736212
03430 Mismatch repair
104736212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:csat03032]
104736212
03400 DNA repair and recombination proteins [BR:csat03400]
104736212
DNA replication proteins [BR:csat03032]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104736212
DNA repair and recombination proteins [BR:csat03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104736212
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
13:complement(9667981..9675186)
|
AA seq |
956 aa
MSDIRKWFMKAHEKGNGSAPKSTSSKTGAVKSAAETAPIKSEQASGDLETAARRKTSKYF
GKEKTIVKDEKEVEELPAKRKLKTESDDLSKSRPRKVTKVDDDDDDFDVPIPRKTRDSTP
SKKLKSGSGRGIATKTVDKDEDDDGEDAQEKETPLKSGGRGRGGRAASGASTGGRGRGGG
RGGFMNFGERKDPPHKGEKEVPEGTPDCLAGSTFVISGTLDSLEREEAEDLIKRHGGRIT
GSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPIKKSLPERTNKGTE
KVCAPPKTSPQKEVTRGKPLAKSSPNKVPPAKGKKKIIETSLPWTEKYRPKVPNEIVGNQ
SLVTQIHNWLSHWHDQFGGTGSKGKGKKVNDAGAKKAILLSGTPGIGKTTSAKLVSQMLG
FQTVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMAANMDRSKHPKTVLIMDEVD
GMSAGDRGGVADLIASIKISKIPIICICNDKYSQKLKSLVNYCLPLNFRKPTKQQMGKRL
MHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSTIKYDDIRQRLLSSAKDE
DISPFSAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLIIQENYLNYRPSGKDEAKRMELL
ARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVFEQGERNFNRFGG
WLGKNSTAGKNRRLMEDLHVHVLASRESSSGRETLRVDYLPLLMNRLTSPLQTLPKDEAV
SEVVDFMNSYSISQEDFDTIMELGKFKGRANPMDGVPPPVKAALTRKYNELNKTRMVRVA
DMVQLPGMKKAPKKRIAAMLEPTVDSLGDEDGEPLAENEEENASDAEEDSEEANDGEKLE
SNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGKAADASAEKKATGRGSGTKRKR |
NT seq |
2871 nt +upstreamnt +downstreamnt
atgtcggatattaggaagtggtttatgaaagcccatgaaaagggaaacggaagtgctccg
aaatcgacctcttccaagacaggtgctgtgaagagtgctgcagagactgcacccataaaa
tcagagcaggctagtggagacctggaaactgctgctagaagaaaaacgagcaagtatttt
ggtaaagaaaaaacaatagttaaagatgagaaagaggtggaagaattacctgccaagagg
aaacttaagactgagtccgatgatttaagcaagtcccgtccaagaaaagttaccaaggtt
gatgatgacgatgacgattttgatgtacctattccaaggaagactcgtgatagcactccc
agcaaaaaactaaagtcggggtcaggtagaggaatcgcaactaaaactgttgataaagac
gaggatgatgatggtgaagatgcccaagaaaaggagactcctctgaaatcaggtggaaga
ggccgtggcggtagagctgcatcaggggcatcaactggtggaagaggtagaggtggaggg
cgaggtgggtttatgaattttggtgaaaggaaagacccaccgcataaaggagaaaaggag
gttcctgaaggcacccctgattgcttagctggatcgacatttgtaattagtggaacactt
gatagtttagaaagagaagaagcagaagatcttataaagcggcatggtggtcgtattaca
ggctctgttagcaagaaaacgacgtaccttttgtgtgatgaagatatcggcggaaggaaa
tctgaaaaagctaaagagctgggcactaagttccttacagaggatggcctatttgacatg
atccggtcctcgaaacccataaaaaagtctctgcctgaaaggactaacaaaggcactgaa
aaagtctgtgcaccaccgaagacaagccctcagaaagaagtgacaagaggaaagccttta
gcaaaaagttcgcccaacaaggttcccccagcgaaaggaaaaaagaaaattattgagact
tccttgccatggacggaaaaatacagaccgaaggttccaaatgagattgttgggaatcag
tcactggtaactcagattcacaactggctgtcccactggcatgatcaatttggaggtact
ggaagtaaaggaaaggggaagaaagtgaatgatgctggtgccaagaaggctatacttttg
agcggaacacctggtattggaaaaacaacatcagcaaagttggttagtcagatgcttggt
ttccagacagttgaggttaatgctagtgacagtcgtggaaaggcgaactcgaatatcgcc
aaaggtattggtggtagtaatgctaatactgtgaaggaacttgtcaataacgaagccatg
gccgctaacatggataggtcaaagcacccgaagactgttctaatcatggatgaagtagat
ggaatgtctgcaggcgacaggggaggtgttgccgatcttattgctagcattaaaatatca
aagattcctatcatctgcatttgtaatgacaaatatagtcagaaactgaagagtttagta
aactactgtcttcccctcaatttccggaagcccacgaaacagcagatgggaaaaaggctg
atgcatattgctaaagcagaaggccttgaagttaatgaaattgccctggaagaactcgct
gagagagtaaatggtgacatacgattggccctaaatcagctccaatatatgagcctgtcc
atgtcaaccatcaagtatgatgatatcaggcaacgcctgctaagcagtgctaaggatgaa
gatatttcccctttctcagctgttgacaagttgtttagttataatggtgggaagctgaga
atggatgaacggattgacctaagcatgagtgatcctgatttggttcctctaattatacag
gaaaactatctcaattataggccatcaggtaaagatgaggcaaaacgaatggagttactt
gctcgtgctgcggaatctattgcggatggagatattatcaacgtgcagattcgaagatac
aggcaatggcaactttctcagtcatgctgtgttgcatcttctattctcccagcttcgttg
ttgcatggatcaagggaggtattcgagcagggtgagcgtaatttcaacagatttggtggg
tggcttggcaagaattcaacggcgggaaaaaatagacggttaatggaggatctgcatgtt
catgtccttgcttcccgtgaatccagctctggaagggagactcttcgtgttgattatctt
cccctgctcatgaatcgcttgactagcccacttcagacgctgcctaaggatgaagctgtt
tcagaagttgttgatttcatgaactcctactctataagtcaggaggacttcgatactatt
atggagttgggaaaatttaaggggcgtgcaaatccgatggatggtgttccacctccagtt
aaagcagctttgaccagaaaatataatgagttgaataaaaccagaatggtacgtgttgct
gacatggtgcaacttccgggaatgaaaaaggcccctaagaagcgaatagctgcaatgctg
gaaccaactgttgatagtttgggagatgaggatggcgagccattagcagaaaatgaagaa
gaaaatgcatcagacgctgaagaagactcagaagaagcaaacgatggagaaaagctagag
tcgaatctaaaaaatctgaatgctagagggatccaagttgaattggatttgaagggagct
gggagctctggttcaagaaaagcagctggtaaaggcagaggcaaagcagccgatgcgtct
gctgagaagaaagctacagggagaggctctggtaccaagagaaagagatga |