KEGG   Camelina sativa (false flax): 104736212
Entry
104736212         CDS       T05044                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03410  Base excision repair
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104736212
   03410 Base excision repair
    104736212
   03420 Nucleotide excision repair
    104736212
   03430 Mismatch repair
    104736212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104736212
   03400 DNA repair and recombination proteins [BR:csat03400]
    104736212
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104736212
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104736212
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_22 PTCB-BRCT AAA_19 AAA_30 RCF1-5-like_lid Rad17 AAA_18 AAA_5 AAA_assoc_2 nSTAND3 BRCT_2 RuvB_N AAA_28 AAA_24 Gp44_lid Zeta_toxin AAA_17 AAA_14 NTPase_1 AAA_2 Sigma54_activ_2 TsaE RsgA_GTPase DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 104736212
NCBI-ProteinID: XP_010454462
LinkDB
Position
13:complement(9667981..9675186)
AA seq 956 aa
MSDIRKWFMKAHEKGNGSAPKSTSSKTGAVKSAAETAPIKSEQASGDLETAARRKTSKYF
GKEKTIVKDEKEVEELPAKRKLKTESDDLSKSRPRKVTKVDDDDDDFDVPIPRKTRDSTP
SKKLKSGSGRGIATKTVDKDEDDDGEDAQEKETPLKSGGRGRGGRAASGASTGGRGRGGG
RGGFMNFGERKDPPHKGEKEVPEGTPDCLAGSTFVISGTLDSLEREEAEDLIKRHGGRIT
GSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPIKKSLPERTNKGTE
KVCAPPKTSPQKEVTRGKPLAKSSPNKVPPAKGKKKIIETSLPWTEKYRPKVPNEIVGNQ
SLVTQIHNWLSHWHDQFGGTGSKGKGKKVNDAGAKKAILLSGTPGIGKTTSAKLVSQMLG
FQTVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMAANMDRSKHPKTVLIMDEVD
GMSAGDRGGVADLIASIKISKIPIICICNDKYSQKLKSLVNYCLPLNFRKPTKQQMGKRL
MHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSTIKYDDIRQRLLSSAKDE
DISPFSAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLIIQENYLNYRPSGKDEAKRMELL
ARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVFEQGERNFNRFGG
WLGKNSTAGKNRRLMEDLHVHVLASRESSSGRETLRVDYLPLLMNRLTSPLQTLPKDEAV
SEVVDFMNSYSISQEDFDTIMELGKFKGRANPMDGVPPPVKAALTRKYNELNKTRMVRVA
DMVQLPGMKKAPKKRIAAMLEPTVDSLGDEDGEPLAENEEENASDAEEDSEEANDGEKLE
SNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGKAADASAEKKATGRGSGTKRKR
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgtcggatattaggaagtggtttatgaaagcccatgaaaagggaaacggaagtgctccg
aaatcgacctcttccaagacaggtgctgtgaagagtgctgcagagactgcacccataaaa
tcagagcaggctagtggagacctggaaactgctgctagaagaaaaacgagcaagtatttt
ggtaaagaaaaaacaatagttaaagatgagaaagaggtggaagaattacctgccaagagg
aaacttaagactgagtccgatgatttaagcaagtcccgtccaagaaaagttaccaaggtt
gatgatgacgatgacgattttgatgtacctattccaaggaagactcgtgatagcactccc
agcaaaaaactaaagtcggggtcaggtagaggaatcgcaactaaaactgttgataaagac
gaggatgatgatggtgaagatgcccaagaaaaggagactcctctgaaatcaggtggaaga
ggccgtggcggtagagctgcatcaggggcatcaactggtggaagaggtagaggtggaggg
cgaggtgggtttatgaattttggtgaaaggaaagacccaccgcataaaggagaaaaggag
gttcctgaaggcacccctgattgcttagctggatcgacatttgtaattagtggaacactt
gatagtttagaaagagaagaagcagaagatcttataaagcggcatggtggtcgtattaca
ggctctgttagcaagaaaacgacgtaccttttgtgtgatgaagatatcggcggaaggaaa
tctgaaaaagctaaagagctgggcactaagttccttacagaggatggcctatttgacatg
atccggtcctcgaaacccataaaaaagtctctgcctgaaaggactaacaaaggcactgaa
aaagtctgtgcaccaccgaagacaagccctcagaaagaagtgacaagaggaaagccttta
gcaaaaagttcgcccaacaaggttcccccagcgaaaggaaaaaagaaaattattgagact
tccttgccatggacggaaaaatacagaccgaaggttccaaatgagattgttgggaatcag
tcactggtaactcagattcacaactggctgtcccactggcatgatcaatttggaggtact
ggaagtaaaggaaaggggaagaaagtgaatgatgctggtgccaagaaggctatacttttg
agcggaacacctggtattggaaaaacaacatcagcaaagttggttagtcagatgcttggt
ttccagacagttgaggttaatgctagtgacagtcgtggaaaggcgaactcgaatatcgcc
aaaggtattggtggtagtaatgctaatactgtgaaggaacttgtcaataacgaagccatg
gccgctaacatggataggtcaaagcacccgaagactgttctaatcatggatgaagtagat
ggaatgtctgcaggcgacaggggaggtgttgccgatcttattgctagcattaaaatatca
aagattcctatcatctgcatttgtaatgacaaatatagtcagaaactgaagagtttagta
aactactgtcttcccctcaatttccggaagcccacgaaacagcagatgggaaaaaggctg
atgcatattgctaaagcagaaggccttgaagttaatgaaattgccctggaagaactcgct
gagagagtaaatggtgacatacgattggccctaaatcagctccaatatatgagcctgtcc
atgtcaaccatcaagtatgatgatatcaggcaacgcctgctaagcagtgctaaggatgaa
gatatttcccctttctcagctgttgacaagttgtttagttataatggtgggaagctgaga
atggatgaacggattgacctaagcatgagtgatcctgatttggttcctctaattatacag
gaaaactatctcaattataggccatcaggtaaagatgaggcaaaacgaatggagttactt
gctcgtgctgcggaatctattgcggatggagatattatcaacgtgcagattcgaagatac
aggcaatggcaactttctcagtcatgctgtgttgcatcttctattctcccagcttcgttg
ttgcatggatcaagggaggtattcgagcagggtgagcgtaatttcaacagatttggtggg
tggcttggcaagaattcaacggcgggaaaaaatagacggttaatggaggatctgcatgtt
catgtccttgcttcccgtgaatccagctctggaagggagactcttcgtgttgattatctt
cccctgctcatgaatcgcttgactagcccacttcagacgctgcctaaggatgaagctgtt
tcagaagttgttgatttcatgaactcctactctataagtcaggaggacttcgatactatt
atggagttgggaaaatttaaggggcgtgcaaatccgatggatggtgttccacctccagtt
aaagcagctttgaccagaaaatataatgagttgaataaaaccagaatggtacgtgttgct
gacatggtgcaacttccgggaatgaaaaaggcccctaagaagcgaatagctgcaatgctg
gaaccaactgttgatagtttgggagatgaggatggcgagccattagcagaaaatgaagaa
gaaaatgcatcagacgctgaagaagactcagaagaagcaaacgatggagaaaagctagag
tcgaatctaaaaaatctgaatgctagagggatccaagttgaattggatttgaagggagct
gggagctctggttcaagaaaagcagctggtaaaggcagaggcaaagcagccgatgcgtct
gctgagaagaaagctacagggagaggctctggtaccaagagaaagagatga

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