Camelina sativa (false flax): 104736424
Help
Entry
104736424 CDS
T05044
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104736424
Transcription machinery [BR:
csat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104736424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
104736424
NCBI-ProteinID:
XP_010454703
LinkDB
All DBs
Position
13:complement(11074571..11076730)
Genome browser
AA seq
520 aa
AA seq
DB search
MGVVFISSSAARSPLGLSTDLLTIHRSSLKKPSIVAFKADDSSNSALIIPPREQVLIPSE
KLNEKKRVVTKRKPCKKTPKKTSSLDDHNAAPSCSLGVDYYNEAAARLENIYKLSPAAVE
DDVVDGGSKAKVSRRRKRKQSGEVEKKVVVRNNVKKDKRLSLDRRIALKRNCEEKPFVVA
SAENKVTKRQQEEEKIERLVRDYSASNDILSLDWKKMKIPPVLSSTEHAWLFKLMQPMKA
LLEVKDELQKKLGREPREAEIAKEINMTTGEVKKKIEMGRAARNKLIKHNLRLVLFVMNK
YFQDFTNGPKFQDLCQAGMKGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTR
VPFGLESVRVEIYKAKMELFFELGRLPTENEVVEKLKITPERYREVLRAAKPVFSLNSKH
AVTQEEFINGITDVDGVGADNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT
LGEIAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYIL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcaagttcagcagcaagatcaccactcggtttaagcaccgat
cttttgacaatacatcggtcttcccttaaaaaaccatccattgtcgcattcaaagccgat
gattcaagcaattcagctttgatcattcctcctcgagaacaagttttgatcccctcggaa
aagcttaatgagaagaagagagtagtcacgaagaggaagccgtgtaaaaaaaccccaaaa
aaaacaagttctttggatgatcacaatgcagctccttcgtgttccttaggtgttgactat
tacaacgaagctgctgctagacttgagaacatatacaagcttagtcctgcagcagtcgag
gatgatgttgttgatggcggatccaaagctaaagtttcaaggaggagaaaacggaaacag
agtggtgaggtcgagaagaaagtagtagtgaggaacaatgtgaagaaagataagcgtttg
agtcttgatagacggatagctttgaaaaggaactgtgaagagaaaccatttgttgttgct
tctgctgagaataaagtaactaagaggcagcaagaagaggagaagatcgagaggcttgtg
cgggactattcagcttctaatgatatattgagcttggactggaaaaaaatgaagatacct
cctgttctttcttctactgaacatgcttggttgtttaagttgatgcagcctatgaaggct
ctacttgaagtgaaagatgaactgcaaaagaaattgggaagagagccgagggaagctgaa
atagctaaagagatcaacatgaccactggtgaagttaaaaagaaaattgaaatgggtaga
gctgcaagaaacaaacttattaagcacaatctccgccttgtcttgtttgttatgaacaaa
tattttcaagatttcaccaatggaccgaaatttcaagacctttgtcaagctggtatgaaa
gggcttatcacagcaattgaccgttttgagccgaaaaggaagtttcgtctatcgacttat
ggtttgttttggataagacatgccatcatacggtctatgacaacctcaaactttactcgt
gttccatttggacttgaatcggttagagttgagatctataaagcgaagatggagctattt
tttgagctggggagactccctacagagaacgaggtagttgagaaactcaagataacacct
gagagataccgtgaagtattgagggctgcaaaacctgttttctcactaaattcaaaacat
gcggttactcaagaagaattcatcaatggaatcacagatgttgatggtgttggagctgat
aacaggagacaacctgctcttcttaggcttgctctcgatgatgtgctcgattcattgaag
ccgaaagagagtctggttattcgacagaggtacggtcttgatgggaaaggagacaggact
ctaggagagatagctggaaatctcaacatctctagagaaatggtgaggaaacatgaagtc
aaggctttgatgaagctcaaacatcaggcccgagttgattaccttcgccaatacattctc
tga
DBGET
integrated database retrieval system
