Camelina sativa (false flax): 104736600
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Entry
104736600 CDS
T05044
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104736600
03012 Translation factors [BR:
csat03012
]
104736600
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104736600
Translation factors [BR:
csat03012
]
Eukaryotic type
Initiation factors
eIF-3
104736600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
Beta-prop_ELP1_1st
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
104736600
NCBI-ProteinID:
XP_010454917
UniProt:
A0ABM0VEE7
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Position
13:complement(12944482..12948092)
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AA seq
715 aa
AA seq
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MVAAVDIDGRAAQLGINWSEINLDSIHLPPRDDFGIASDDEAVYHEDQSEFDTGFGNIIV
VDHLPVVTREKYEKLEGVVKKIYNQLGVIRENGLWMPVDPDTELTLGYCFIEFNTAQEAQ
NAKEKTHGYKLDKSHIFDVNKFDDFDRLMNVKEEWEPPQASFYVPAENYQKWLTDEKARD
QLVIRHGADTEVYWNDPRQKMPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGAD
TFTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEVKVFDVRTGRMMRDFKG
SADEFSIGGLGGVAGASWPVFRWAGGNDDKYFAKLSKNTISVYETETFSLIDKKSMKVDN
VVDICWSPTDSILSLFVPEQGGGNQPAKVCCSNPIPSKVELRQKNLFSVSDCKMYWQSSG
EYLAVKVDRYTKTKKSIYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVI
HGDQPRPDVSFYTMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEF
FNVDELETMATAEHFMATEIEWDPTGRYVATAVTSVHEMENGFTIWSFNGNLLYRTLKDH
FFQLAWRPRPPSFLTAEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDREKRKALKEEWE
KWVMQWKSLYEEEKLARQNLRDGEVSDVEEDEYEAKEVEFEDVIDVTEEIVQESM
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggccgttgatatagatggccgagcggctcagttagggattaattggtctgag
attaatctcgattcaatccatcttcctcctcgagacgattttgggatcgcgagtgatgat
gaagcagtataccacgaggatcagtcagaattcgatactggattcggtaacataatcgta
gtagatcacctccctgttgttaccagggaaaagtatgagaaacttgaaggtgttgtcaag
aaaatttacaaccagttaggtgtgatcagggagaatggactgtggatgcccgttgatccc
gataccgaattgacattgggttactgttttattgagttcaataccgctcaggaagcgcaa
aatgctaaggaaaagactcatggctacaagctggacaagtctcatatctttgatgtaaac
aagtttgatgatttcgacaggttgatgaatgtgaaggaggagtgggagcctcctcaggcc
agtttttatgtacctgcggaaaattatcaaaaatggcttactgatgagaaagcccgggac
cagctagtcattcgtcatggtgctgatactgaagtttactggaatgatcctaggcagaag
atgcctgaacctgttcataagcgtccttattggacagagagttatgtgcagtggtctcct
ctaggtacataccttgtgacacttcacaagcaaggagcagctgtttggggtggtgctgat
acattcacgcgtctcatgcgttatcagcattctatggtaaaactagttgatttctcgcca
ggtgagaaatatctggtaacttaccatagccaagaaccaagcaacccacgagatgcaagt
aaagtagaagttaaggtctttgatgtgaggaccggtaggatgatgagagatttcaagggt
agtgctgatgagttttcaattggaggacttggtggtgttgctggtgcctcttggcctgtg
ttcagatgggctggtggaaatgatgataaatactttgccaagcttagcaaaaacactata
tctgtctatgagactgagactttcagcctaatagacaagaaatccatgaaggtcgataat
gttgtggatatctgctggtctcctactgattctatcctttcattgtttgttcctgaacaa
ggtggtggaaaccaacctgccaaggtatgttgctctaatccaatcccgagcaaggtggag
ttgaggcagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtgga
gagtatcttgctgtcaaggttgatcgatacacaaaaactaagaagagcatatactctgga
tttgagcttttccgtatcaaagagagggatattcccattgaggttcttgagctggacaac
aagaatgacaagatcattgctttcgcgtgggagcccaagggtcacaggtttgctgtgatt
catggtgaccaaccaagaccagatgtcagtttctacacaatgaagactgcacaaaacact
ggaagggtttcaaagctcgcaactttgaaggccaaacaagccaatgccctcttctggtcc
cccactggcaagtacatcattcttgctgggttaaagggattcaatggccagcttgaattt
ttcaacgtggatgagctcgagacaatggccacagccgaacacttcatggccacggaaatc
gaatgggacccaactggaaggtatgttgcaactgctgtgacatcagtccacgagatggag
aatgggttcaccatatggtctttcaacgggaatttgctttaccggacactgaaggatcat
ttcttccagttggcttggcgtccaagaccgccatcattcttgactgcggagaaggaagaa
gagatagcaaagaacctgaagaagtacagcaagaagtatgaggcagaggatcaagacgtg
tcgttgctgttgagcgaacaagacagagagaagaggaaggcattaaaggaagaatgggaa
aaatgggtgatgcagtggaagtctctctatgaagaggagaaactcgcgaggcaaaatctt
cgggatggtgaagttagtgatgtggaagaagatgagtatgaagccaaagaagttgagttt
gaggatgttatcgatgtaaccgaggaaatcgttcaagagtcgatgtaa
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