Camelina sativa (false flax): 104736602
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Entry
104736602 CDS
T05044
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104736602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104736602
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
RNases
104736602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBCA
Motif
Other DBs
NCBI-GeneID:
104736602
NCBI-ProteinID:
XP_010454919
LinkDB
All DBs
Position
13:complement(12958465..12961765)
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AA seq
568 aa
AA seq
DB search
MSSSKRKRDAEDVGESGDGSDVKSNTGNSFFDIYGPEAKAELDFKSPEATLNLQDVQGLV
TWVLAEGYMPSWVFIKNKPLIPKVVMLYLPGLDAALYLSQSKALASLKSCCGNPIALLAL
SSVVDDMRTIDTILTCNVKRKKTVTSSVETPPLVSSPEAGNLMGKSFIEIIKDIPFPVAY
YTLSRKEMEQNGYTFEQFEFTPTLPAPPGVSHHEIVALDCEMCITKEGLELTRVTLVDIQ
GQVLLDRLVKPTNPITDYNTRYSGITAVMMEGVTTTLKDIQAEFLRLVFEETILVGHSLE
NDLFSLKISHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQLSESGHDSVEDAKAA
MDLALLKIKHGPDFGSPPEVRRKKLLAILNESGKSTSMIDNINIVKRYASESSNSIPVSC
DDEALSKAMKEAKNKRSQFVWTQFSELNTHFQSRANDPQKLNSRIAEMISSLTCNNNKSL
KKKNNVSLETKEILKKMNERVQSLYDALPTNAMFIVCTGHGDTSIVDRVRKMLKDENEIG
LDREKVVKVLEELQAQAEVALCFVGIKQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcgaaacggaagcgcgacgcggaagatgttggagaaagtggcgacggtagt
gatgttaagagcaataccggaaacagcttcttcgatatatatggacccgaagcaaaagca
gaactcgatttcaaaagccctgaagcaacattgaacttacaagatgttcagggacttgtg
acatgggttcttgcagaaggttatatgccctcgtgggtgtttattaagaacaagcctctc
attcctaaggttgtaatgctttaccttcctgggttggatgcagctttatacttatcacag
tctaaagcacttgctagtttgaaatcgtgttgtggcaatcctatagcacttttagctttg
agctctgtagttgatgacatgaggacaattgatacaatccttacttgcaatgttaaaaga
aagaaaactgttacgagttcagtggaaacacctccccttgtatctagcccagaagcaggc
aatctgatggggaaatcgttcattgagatcataaaagacataccattccctgttgcatac
tatactcttagtcgaaaggaaatggaacaaaatggatacacttttgaacaatttgagttt
acccctacacttcctgcaccaccaggagtatctcaccatgaaattgtggctcttgattgc
gagatgtgtattacaaaggagggtttggagttaacaagagtgacactggtcgatatccaa
ggacaggttctattagatagattagtcaagccaacaaatcctattactgattataacaca
aggtatagtggaataacagctgtgatgatggaaggagttacaacaactcttaaagatatt
caggcagagttcttaaggctggttttcgaagagaccatattagtcggacactccttggaa
aatgacttgttttctttgaagatctctcataatctggtgattgacactgcagtactatac
aagcatccacatggtcgatcttataaaactaaacttcgaattctagcaaaaaagtttctt
gctagagagatacagctgtctgaatctggacatgacagcgtagaggatgcaaaagcagcc
atggatttggcactattgaagataaaacatggacctgattttggctcaccaccggaagtg
agaagaaaaaagctactcgccattttgaatgagagcgggaaatctacttctatgattgac
aatatcaacattgtgaagcgatatgcttctgagtcatccaattcaattccagtttcttgt
gacgacgaagcactttcaaaggccatgaaggaggcaaagaacaagcggtcacagttcgtt
tggacacagttctcagaattgaatacacatttccagagcagagcgaatgatccgcagaaa
ctaaattccagaatagcggagatgatctcatcgcttacatgtaacaacaacaagagcctt
aagaagaaaaacaatgtttcacttgaaacgaaggaaatattaaagaaaatgaacgagaga
gtgcaatccctttacgatgcgttacccaccaatgcgatgtttatagtttgcaccggacac
ggagacacatccattgtcgacagagtgaggaaaatgcttaaagatgagaatgaaatcggg
cttgaccgtgagaaagttgtgaaggttcttgaagagcttcaagcacaagccgaagtagct
ctctgttttgttggtatcaagcaataa
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