Camelina sativa (false flax): 104736656
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Entry
104736656 CDS
T05044
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104736656
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104736656
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104736656
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104736656
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
104736656
Ion channels [BR:
csat04040
]
Chloride channels
Chloride channel (CLC)
104736656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
104736656
NCBI-ProteinID:
XP_010454977
LinkDB
All DBs
Position
13:13457259..13462762
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AA seq
793 aa
AA seq
DB search
MLSNHLQNGIESDNLIWSRVPESDDTSTDGVGLLNSRRDGGGGVDSLDYEVIENYAYREE
LAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQKSYFAG
FIVYLLINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSI
GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWPQLFKSDRDRRDLVTCGCAA
GVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGICGHFGG
GGFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNSLHKRGNRVK
IIEACIISCITSAISFGLPLLRKCSPCPESVAESGIECPRPPGMYGNYVNFYCKTDNEYN
DLATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIM
IGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLL
PLIMLVLLISKAVGDAFNEGLYEVQARLKGIPLLESRPKYHMRQMVAKEACQSQKVISLP
RVIRVADVASILGSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCD
PSARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKV
YNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVEVQQSTSVRGRYSETTTTR
MDATRPLLDDLLG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgaatcatctccagaacgggatcgaatccgataacttaatctggtctcgtgtc
cctgaatccgatgatacatccaccgacggcgttggtctactcaactctcgccgtgacggt
ggcggaggtgtcgatagtctcgattacgaagtcatcgagaattacgcttacagagaagaa
ctagctcatcgtgggaagctttatgtaggttactacgttgctgtcaaatggttcttctct
ttactcatcgggatcggaactggattagctgctgtgtttatcaatctctcagttgagaat
ttcgctgggtggaaatttgcactcacttttgcaatcattcagaagtcttatttcgccggg
tttatagtttatcttctcatcaatttagttttagtgttttcttctgcgtatatcattact
caattcgctcctgctgctgctggttctggcattcctgagattaagggttatctcaatgga
attgatattcctggcaccttgctatttagaacgcttattggaaagatatttggaagcatt
ggttctgttgggggtggcttagctttagggaaagaaggtccccttgtacatactggtgcc
tgcatcgcctcgttgcttggtcagggtggatcgacgaaatatcatttgaattctagatgg
ccgcaactttttaagagtgacagagatcgtcgtgatcttgtcacttgtggatgtgcagcg
ggagttgctgctgcttttagagctccagttggaggagtgttatttgcattagaagaggtt
acctcatggtggagaagtcaacttatgtggcgtgtctttttcacttctgctattgtggcg
gttgtggtgcgtactgccatgggatggtgcaagagtggaatatgtggacactttggtggt
ggtggtttcattatatgggatgtatcagatggtcaagatgactattacttcaaagagcta
ctgccaatggctgtaattggagtaattggaggtctactcggtgcattatttaaccaactt
acactctatatgacatcttggcgtcggaattctttgcacaagagaggaaatcgagtgaag
ataattgaagcatgcattatctcttgtataacttcagcaatctcatttgggcttcctctc
ctaagaaaatgcagtccatgccctgagtcagttgctgaatctggtattgaatgcccacgg
cctccaggaatgtatgggaattacgtaaatttctactgcaagacggataatgaatataat
gatctcgctaccattttcttcaatactcaggatgatgctataaggaatttgttcagcgca
aaaacaatgcgagagttcagtgctcagagtctactaacttttttggctatgttttacaca
ttagcagtggtgacgtttggcactgctgttcccgctggtcagtttgttcctggaataatg
ataggttcaacttatgggcgccttgtaggcatgtttgtggtcaggttttacaagaagctc
aacattgaggagggaacttatgctttgctgggagctgcttcatttcttggaggctcaatg
cggatgactgtgtctttatgtgttatcatggttgaaatcacaaataacctgaaacttttg
cctctaataatgctggttcttctcatctcaaaggccgtcggtgatgctttcaatgaagga
ttgtatgaagtgcaagcacgcctgaagggcattccgttactggaatcgagacccaagtat
catatgcgtcaaatggtagcaaaggaagcatgtcaaagtcagaaggtaatctctttacct
cgagttatcagggttgcagatgttgcttcaattttaggcagcaataaacacaatggattt
ccggtaatcgaccacacgagaagtggtgaaacacttgtcattgggttagttcttcgaagt
cacttgcttgttctacttcaatctaaagtcgatttccaacatagtcctttgccctgtgat
ccaagtgccagaaatatcaggcacagttttagcgagtttgctaaacctgtttcatcgaaa
gggttatgcatagaagatatacatctaacttcagatgatttagagatgtacatagatctt
gctccatttttgaatccctctccatacgttgttcccgaagacatgtctttgacaaaggtt
tataaccttttccggcaacttggattgagacatctcttcgtcgttccccgtccttctcgt
gtgataggattaatcaccagaaaggatttgctaattgaggaaaatggggaatcatcagca
gtggaagtccaacagtcaactagtgtaagaggtcggtacagtgagacaacaacaacgcgg
atggatgctacacgtccgctcctagacgatcttttaggctaa
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