Camelina sativa (false flax): 104737123
Help
Entry
104737123 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 6-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104737123
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104737123
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104737123
03019 Messenger RNA biogenesis [BR:
csat03019
]
104737123
03041 Spliceosome [BR:
csat03041
]
104737123
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104737123
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
104737123
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104737123
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104737123
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104737123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
104737123
NCBI-ProteinID:
XP_010455531
LinkDB
All DBs
Position
13:18953361..18955564
Genome browser
AA seq
322 aa
AA seq
DB search
MDETLLDDIIRRLLATNNGRTVKQAQITEAEIRQLCLASKEVFLSQPNLLELEAPIKICG
DVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKVKYKFNFFLLRG
NHECASINRVYGFYDECKRRYNVRLWKTFTECFNCLPVSALIDDKILCMHGGLSPDIKSL
DDIKRIPRPIDVPDQGILCDLLWADPDGEIQGWGENDRGVSYTFGADKVAEFLQTHDLDL
VCRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKASEKKG
RFGFNNNVPRPGTPPHKGGKGG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacattacttgacgatataatacggcggcttttagcgacgaataatggaaga
acggtgaagcaagcacagataactgaggcggagatacggcagctatgtttggcttccaaa
gaggttttcctcagccagcctaatctccttgagcttgaggctcctatcaagatttgcgga
gatgttcatgggcagtttccagacctcttgcgattgtttgagtatggtggctatccgcca
gcagcaaattacttgtttcttggggattatgttgatcgtggtaagcagagcattgagacg
atttgccttcttcttgcctataaggtcaaatacaagttcaacttctttcttctcagaggc
aatcacgaatgtgcgtcaatcaaccgtgtgtacggattttatgatgaatgcaaaagaaga
tataatgtccgcctttggaaaactttcactgagtgcttcaactgtcttcctgtttctgct
ctcattgatgataagattctctgcatgcatggtggactatcgcctgatattaagagctta
gatgatatcaagagaattcctcgtcctattgatgttcctgatcagggaattctttgtgat
ctgttatgggctgatcctgacggagagattcaaggctggggggagaatgacagaggtgtc
tcatatacatttggggctgataaagttgctgagtttcttcaaactcatgaccttgatctt
gtatgccgagctcatcaggttgtagaagatggatatgagttctttgcaaagagacaactg
gtgacaatattctctgcacccaattactgtggcgagtttgacaatgctggcgcaatgatg
agtgttgatgatagcttaacatgttcattccaaatccttaaggcatctgagaagaaagga
agatttggattcaacaacaatgttcctagaccaggaaccccacctcataagggtggaaaa
ggtggttaa
DBGET
integrated database retrieval system
