Camelina sativa (false flax): 104737312
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Entry
104737312 CDS
T05044
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104737312
09122 Translation
03013 Nucleocytoplasmic transport
104737312
03015 mRNA surveillance pathway
104737312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104737312
03041 Spliceosome [BR:
csat03041
]
104737312
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104737312
TREX complex
104737312
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104737312
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104737312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
104737312
NCBI-ProteinID:
XP_010455759
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All DBs
Position
2:24877844..24879399
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AA seq
244 aa
AA seq
DB search
MSTGLDMSLDDMIAKNRKSRGGAGPARGSGSGSGSGPGPTRRNNPNRKSNRSAPYQSAKA
PESTWGHDMFSDRSEDFPSRSSRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKR
YTVHFDRSGRSKGSAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEILGTNLQSAAAPSGR
PANGNSNGAPWRGGQGRGGQQRGGGRGGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGD
METN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactggattagatatgtctctcgacgacatgatcgccaagaaccgtaagtctcgt
ggtggagccggccccgcccgtggatctggatctggttccggatccggaccgggtccaact
cgtcgcaacaaccctaatcggaaatcaaaccgatctgctccataccaatcagccaaggcg
ccggagtccacctggggtcacgacatgttctccgatagatctgaagatttcccttcccgg
tcaagccgttcttccgccggaatcgaaactggaaccaagctttacatctccaatttggat
tacggtgtcatgaacgaagatatcaaggaattatttgctgaagttggggaacttaaacgc
tacacagtccattttgataggagtggaagatctaagggaagtgctgaagtagtgtattct
cggcgtggtgatgcactcgcagctgtgaagaagtataacgatgttcaactggatggaaaa
cccatgaagatagagattttgggaaccaatcttcaatccgctgcagcaccttctggtaga
cctgcaaatggaaactccaatggtgctccatggagaggaggacaagggagaggtggtcaa
caacgtggcggtgggcgaggtggtggtggtggccgtggtaggcgacctggtaagggccct
gcagagaagatatctgctgaagatcttgatgcagatctcgacaagtatcattctggagat
atggagacaaactaa
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integrated database retrieval system