KEGG   Camelina sativa (false flax): 104737351
Entry
104737351         CDS       T05044                                 
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
csat  Camelina sativa (false flax)
Pathway
csat03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104737351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csat03009]
    104737351
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104737351
SSDB
Motif
Pfam: Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Utp21 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_EML ASA1 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_DCAF4 PAC11 Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_Vps41 DSE1_N Beta-prop_EIPR1 Beta-prop_SPT8 CFAP251_N Beta-prop_WDR19_1st Beta-prop_SCAP TRM82_WD Beta-prop_ACSF4 Beta-prop_WDR75_2nd NBCH_WD40 Utp12 WD40_RFWD3 Beta-prop_LRRK2 MIOS_WD40 BCAS3_WD40 VID27
Other DBs
NCBI-GeneID: 104737351
NCBI-ProteinID: XP_010455814
UniProt: A0ABM0VGI8
LinkDB
Position
13
AA seq 911 aa
MGIFEPFRAIGYITSTVPFSVQRLGTETFATVSVGKAFQIYNCAKLNLVIISPQLPKKIR
ALASYRDYTFAAFGNEIAVFRRAHQVATWSKHVAKVDLLLLFGEHVLSLDVEGNVFIWAF
KGIEEHLAPTGNLQLTGKFTPSSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYEFKGW
GSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHAARGAVTALSFSTDGRPLL
ASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASSDNSLKMWIFDTN
DSDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQEQQSRELSQRHISRR
AKKLRLKDEELKLKPVVSFDCAEIRERDWCNVVTCHMDTAEAYVWRLQNFVLGEHILKPC
PENPTPIKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYFDISEKSRYAHDGEVIGV
ACDSTNTLMISAGYHGDIKVWDFKKRELKSRWDVGCSLVKIVYHRVNGLLATVADDFVIR
LYDVVTLKMVREFRGHTDRVTDMCFSEDGKWLLSSSMDGSLRIWDVILAKQIDGVHVDVP
ITALSLSPNMDVLATAHSDQNGVYLWVNQSMFSGLPSVDSYASGKDVVNVKLPSVSALTS
SEADDDDMETQVLESSGAPQASSFSISPKQIPELVTLSLLPKSQWQSLINLDIIKARNKP
IEPPKKPEKAPFFLPSIPSLSGDILFKPNDSEAADGENEEKNKKDDNMKNFDALESPFSK
LLKSSWDSKHFLDFTNYIKSLSPSALDMELRMLEIIDEEDIEEIIKRPEFISIGQLLDYF
INEISCKNDFEFMQAVVKLFLKIHGETIRCHPSLQEKAKALLETQSLVWQKMDKLFQSTR
CIVTFLINSQF
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgggaatcttcgaaccgtttagagcaataggttacataaccagtacggttccgttctcc
gtccagcgattgggtaccgagaccttcgccaccgtcagcgttggcaaagcttttcagatt
tataattgtgccaagctcaatcttgtcattatcagtcctcaactcccaaaaaaaattaga
gctctagcttcttaccgagactacacttttgctgcttttggaaatgaaatcgctgtcttt
aggcgtgctcatcaggtagcaacttggagcaaacatgttgctaaagttgacctgctactg
ttgtttggagaacatgtgctaagtcttgatgttgaaggaaatgtgttcatttgggcgttc
aaaggaatcgaagaacatctagctcccactggaaatcttcagcttactggaaagtttact
ccgagctctattgttcatccagatacttatctgaacaaggttcttgtagggagccaagag
ggtccgttgcagctatggaacataaatactaagaagatgctctatgagttcaagggttgg
ggttcatctgtcaccagttgtgtttcgtcccctgctctggatgttgttgccattggttgt
gctgatggaaagatccatgtgcataacattaaattggacgaagagatcgtaacatttgaa
cacgctgcccgaggtgctgttactgctttgtctttcagtacagatggacgtcctcttctt
gcgtctggaggttcctttggtgtcataagcatctggaatcttaacaaaaagaggcttcag
tcagtcataagggatgcacatgacagttctataatctcattgaactttttagcaaatgag
cccgtgctaatgagtgcatcatcagataactcactcaaaatgtggatatttgacacaaat
gattctgatcctcgcctattacgcttccgctctgggcatagtgctcctcctttgtgtatc
aggttctactctaatggacggcacattttgtctgctggccaggatcgtgccttccgcctg
ttctcggtcatccaagagcaacaaagtagagagctttctcaaagacacatatccaggcga
gccaaaaaactccgactgaaggacgaagagcttaaattgaagcctgttgtttcatttgat
tgcgctgaaattagggagcgtgactggtgcaatgttgttacttgccatatggatacagca
gaagcatatgtatggagacttcagaactttgttcttggagagcatatcctcaaaccatgc
cctgagaatccaacaccaattaaggcatgtgcaatcagtgcctgtggaaactttgcagta
gtcggaacagcgggtggatggattgagagattcaacctccaatctggaatcagccggggt
agttacttcgatatttcagagaaaagtaggtacgcccatgacggagaagttattggagtt
gcttgcgactccacaaatacactcatgataagtgcaggatatcatggggacataaaggtt
tgggatttcaaaaagcgggaattaaagtcccggtgggatgttggatgttcattggttaaa
attgtctaccaccgtgtaaatggtcttttggctacggtggcagatgattttgttatccgt
ttgtatgatgttgtgacgctaaagatggttcgtgaatttagaggtcatacagaccgagta
acggatatgtgctttagtgaggatggcaagtggctcctctcatctagcatggacggaagt
cttagaatttgggatgtcatattggcaaagcagattgatggagtgcatgtcgatgtacca
ataacagcattgtctttatcaccaaatatggacgttttggcaactgcccactctgatcag
aacggggtctacttgtgggttaaccaatccatgttctctgggcttccgagtgttgattct
tatgctagtgggaaagatgtcgtaaatgttaaattgccttcagtctctgcgttgacatct
tctgaagctgatgatgatgatatggagacgcaagttttagaaagttctggagctccacaa
gctagcagtttctctatttcccctaagcagatcccagaacttgttactctgtctctattg
ccaaaaagccaatggcagagtttgatcaacttggatataataaaggctcgcaataaacca
atagagcctcccaaaaaacctgaaaaggctccttttttcttgccctcaattccctcgctt
tctggagatatattattcaagccaaatgactcggaagctgctgatggggagaatgaggaa
aagaataaaaaagacgataacatgaagaactttgatgcattggaatctccattctcaaaa
cttctcaaatcatcatgggattcaaaacactttttagattttaccaactacataaagagt
ttatccccgtcagctctcgatatggagctacggatgctggaaatcatagatgaagaagat
attgaagagatcatcaaaagaccggagtttatatcgattgggcaacttctggattacttc
atcaacgagatctcttgcaaaaacgactttgagtttatgcaggcggttgtgaaattattt
ctcaagatacacggtgagaccataaggtgccacccaagtttacaagaaaaggcaaaggcg
cttttagaaactcagagtttggtgtggcagaaaatggataagcttttccagagcacaaga
tgcatagttaccttccttatcaattcacagttttga

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