Camelina sativa (false flax): 104737395
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Entry
104737395 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104737395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104737395
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104737395
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104737395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104737395
NCBI-ProteinID:
XP_010455868
LinkDB
All DBs
Position
2:24925992..24936109
Genome browser
AA seq
1379 aa
AA seq
DB search
METKMEIEFTKKPFIEDVGALKIKSINFSMFSDLEVMKAAEVQVWKNGYYDPNNGGKPHE
GGLLDPRMGPPNKRSICATCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKRC
SNMLLDEKLYEDHLRKMRSPKMEPLKKTELAKAVVKKCSTMASQRVITCKKCGYQNGMVK
KIPAQMGFIGISHDRSKIHGGEVDEFKAAISHTKESSQGINPLTYVLDPNVVLGLFKGMS
DKDCELLYIAHRPENLIITCMLVPPLSIRPSVMIGGTESNENDLSSQLKQIIQDNASLHR
ILNQPTTSTKNMQVWDTVQSEVAKFINSEVRGVQIQPDRKQLSGVLQRLKGKQGRFRANL
SGKRVEFTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYP
GARNVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLENGDVVLFNRQPSLHRMSIMCHR
ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEI
LVASTQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPSILKPIELWTGKQV
FSVLLRPNASVRVYVTLNVKEKNFKKGKRGFDETMCANDGWVYFRNSELISGQLGKATLG
NGNKDGLYSILLRDYSSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGAELNKERKTT
IQEGYDQCQKIIEDFNRGNLQLKAGLDGAKSLEADITGILNTIREDTGRACMHGLHWRNS
PLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVAN
SFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNSSGC
ILQFTYGDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEELLQKFEEELV
RHDKSRVCSDAFVKALRNFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVSRYREKK
IEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVIS
AELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDSKIIEEACLSITP
WSVKNSILKTPRIKLNDNDIRVLDSGLDITPVVDKSRTHFNLHNLKNVLPNIIVNGIKTV
ERVVVAEDMEKNKQKDGEKRWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEA
ARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFE
RTGDHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagatggagattgaattcactaagaagcccttcatcgaagatgttggtgct
cttaaaataaaaagcataaacttctctatgttttctgatcttgaggtcatgaaagccgct
gaagttcaggtctggaagaatggttactacgatcccaataatggtggtaaaccccatgaa
ggcggcttgttggatcctcgaatgggtcctccaaacaaaaggtctatatgcgcaacttgt
gaggggaacttccaaaattgtccgggacactacggatatctgaagcttgacctcccagtt
tacaacattggatacttcaattttatccttgacatactgaagtgcatttgtaagcgctgt
tcgaacatgcttttggacgagaaattgtatgaagatcacttgaggaagatgcggagtccc
aaaatggagccattgaagaagactgaattggcgaaagcggttgtcaagaagtgcagtaca
atggcaagccagagagttataacttgcaaaaaatgtggctaccagaatggtatggtgaaa
aagattccagcccagatgggttttataggtatcagtcatgaccggtctaaaattcatggt
ggagaggttgatgaatttaaagctgcaatatcccacacaaaggagtctagtcaaggaata
aatcctcttacctatgttcttgatcctaacgtggtgcttgggctttttaaaggaatgagt
gacaaggactgtgaacttctttatattgcccacagacctgagaatcttatcataacgtgc
atgcttgtgccacctttatcaatccgaccgtctgttatgattggtggcacagaaagtaat
gaaaatgacttatcatcgcaattaaagcaaatcattcaagacaatgcttctcttcataga
attttgaatcaacctaccacatcgaccaaaaacatgcaagtgtgggatacagtacaaagc
gaggttgcaaaattcattaacagtgaagtccgtggtgttcaaattcagccagacagaaaa
caactgagtggagttcttcagcgtctcaaaggaaaacagggacgtttccgtgcaaatttg
tcaggaaagcgtgtcgagttcactggtagaactgttatttcacctgatcccaatttgaaa
attacagaggtaggaattcccatccttatggctcggatcttaacttttcctgaatgtgtt
tcccgtcataatattgagaagttgagacaatgtgtccgtaatggcccgaataaataccct
ggtgccagaaatgtcagatatccggatggttcttcaaggactttggttggtgattatcgt
aagcgtattgctgatgaactgaccattggatgcatagtggaccgccatttggaaaatggg
gatgttgttctttttaacaggcaaccgagtctgcatcggatgtctattatgtgtcacagg
gcaagaataatgccttggagaacgttgaggttcaatgaatcggtttgtaacccatataat
gctgattttgatggtgatgagatgaacatgcacgtaccacaaacagaggaggctcggaca
gaggctattacattgatgggggtacaaaacaatttatgcaccccaaaaaacggagaaatt
ttagtagcatcaacgcaggattttttgacaacttcctttttgataacgagaaaggacacg
ttttatgaccgtgcagccttttcacttatatgttcttacatgggagatggcatggatgcc
attgatttgcccacaccttcaatccttaagccaatagagctgtggactggtaaacaggtt
tttagtgttttgctgcgtccaaatgcaagtgttagagtctacgtaactttaaatgtgaaa
gagaagaacttcaagaagggaaagcgtggtttcgatgaaacaatgtgcgcaaatgatgga
tgggtttattttcgaaatagtgagctaatatcaggacaactggggaaggctacgttgggg
aatggaaacaaggatggattatattctattcttctaagagattacagctcccatgctgct
gcagtctgcatgaatcggctagcaaaattgagtgctcggtggattggaatccatggattc
tccattggaatcgatgacgttcaacctggtgcagagttgaataaagaaagaaaaaccaca
atccaggaaggatatgaccaatgccagaagataattgaggattttaatcgaggaaatttg
caacttaaagctggtctagatggtgcaaaatcattagaagctgacataacagggattctc
aatacaattcgagaagacactgggagggcctgtatgcacgggttacattggagaaacagt
cccttgatcatgtcacagtgtggttccaaaggatctcctatcaatatcagtcagatggtc
gcatgtgttggtcagcagacagttaatggtcaccgtgctcctgatggatttatagatcga
agtcttcctcatttccctaggatgtccaaatcacctgcagctaaaggttttgttgctaat
tcgttctacagtggtcttactgccacagaatttttctttcacactatgggtggacgagaa
ggtctagttgatacagcggtgaaaactgccagtacaggttacatgtcccgtagactgatg
aaagccttggaggatctattagtccattatgataacacagtgcgaaattccagcggatgt
atacttcaatttacttatggggatgatggaatggacccagcactaatggaaggaaaggat
ggagctcctttaaattttgatagattatttctgaaaatacaggccacatgtcctcctcga
tctcaccacaactatctttcttctgaagaactgttgcaaaagtttgaagaggaattagtc
agacatgataaaagtcgagtttgctctgacgccttcgtgaaagctcttcgaaattttgtt
tccttgcttggagtaaagtctgctagcccgccccaggttttatacaaagcatctggtgtg
actgataagcaactcgaggtatttgtaaaaatttgtgtatctcgctatcgggaaaaaaaa
attgaggctgggactgcaattgggacaataggagctcagagtattggagaacctgggaca
caaatgactcttaaaacttttcactttgccggagttgcgagcatgaatatcacacaggga
gtcccccgaatcaacgaaatcataaatgcttccaaaaatataagcacacctgtcatctca
gcagaacttgaaaaccccctggaattgactagtgcacgatgggtgaaaggacgcatcgaa
aaaactactttaggacaggttgctgagagtatcgaggtgctaatgacttcaacatcagcg
tcagtgagaataattcttgacagtaaaataatcgaggaggcatgtttatctattaccccc
tggtcggtaaaaaattccattctaaagacccccagaatcaaactgaacgataatgatatt
agggttttagactcgggattggacattactcctgtggtggataaaagtaggactcatttc
aatctccacaatctgaagaacgtgctgccaaatattatagtgaatgggatcaaaacagtt
gagcgagttgttgtcgcagaggatatggagaaaaataaacagaaagatggggaaaaaagg
tggaaactgtttgtggagggcacaaacctcctggctgttatggggactccgggaatcaat
gggagaactacgacaagtaacaatgttgtcgaagtgagcaaaacactgggaatcgaagct
gcaaggacaacaattattgatgaaatagggacagttatgggtaaccacggtatgagtata
gacattcgtcacatgatgcttttggctgatgtcatgacttacaggggggaggttctcggg
attcaaagaaccggtattcagaagatggacaaaagtgtgctgatgcaggcatcttttgag
aggactggagatcatttatttagtgcagcaattagcggaaaggttgataacatagaggga
gtcacagaatgcgtgattatgggcataccaatgaagctcggaactgggatactcaaagtc
ctccaaaggaccgatgatctgcccaagttgaaatatggacctgatccaatcatctcttga
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