Camelina sativa (false flax): 104737397
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Entry
104737397 CDS
T05044
Name
(RefSeq) DNA damage-binding protein 1a-like
KO
K10610
DNA damage-binding protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104737397
09124 Replication and repair
03420 Nucleotide excision repair
104737397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104737397
03400 DNA repair and recombination proteins [BR:
csat03400
]
104737397
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
104737397
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104737397
TCR (transcription coupled repair) factors
Cul4-CSA complex
104737397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
104737397
NCBI-ProteinID:
XP_010455869
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All DBs
Position
13:21509327..21516162
Genome browser
AA seq
1088 aa
AA seq
DB search
MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVL
YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANAFKAIPIRPSITKAYGRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAVVFVGSSYGDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLE
RQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS
FISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR
DEWHTPAGFAVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPI
GDNPNYSQLASVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFQLDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICH
QEQTRTFGICSLGNQTNAEESEMHFVRLLDDQTFEFISTYPLDSFEYGCSILSCSFTDDK
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGA
IEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVI
KGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRSKMEDISKSMNVQVEELCKR
VEELTRLH
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatggaactacgttgttacggctcacaaaccgaccagtgtgactcactcttgc
gttggcaacttcaccagtcctcaagagcttaatctcattgtagcgaaatgtactcgaatt
gagattcatttgcttaccccacagggacttcagcctatgctggatgttcctatatatgga
agaattgctactctggagttgttccggccacatggtgaagcgcaagactttttgttcatt
gcaactgagagatacaaattctgtgttcttcaatgggatgctgagtcctctgagcttatt
acaagagcaatgggggatgtttctgatcgtataggccgaccaacagacaatggtcagatt
ggcataattgatccagattgtagattaattggacttcatctgtatgacggcttgttcaag
gttattccttttgataacaagggacagctcaaggaagcttttaatatcaggctagaggag
ttgcaggttctggatatcaagtttctgtttggatgtgcaaagcctacaattgcagtactt
tatcaggacaacaaagatgctcgtcatgtcaaaacatatgaagtatctctaaaagataag
gattttgtcgagggtccatggtcacagaataatctcgacaatggtgctgatctactgatt
cctgtaccaccacctctctgtggcgtccttattatcggcgaagaaacaattgtctattgt
agtgctaatgcattcaaagcaataccaataagaccttctatcactaaagcatatggaaga
gttgatgttgatggctctaggtatcttcttggtgaccatgctggactgattcatctgctt
gttataacacacgagaaagaaaaggtcactggcctcaaaattgagcttttgggtgaaacg
tccattgcatcgactatatcgtaccttgacaatgctgttgtctttgtcggctcaagctat
ggcgattctcagctagtaaagctaaatcttcatcctgatgcaaaaggctcatatgtagaa
gtcttggaaaggtatatcaatttggggcctatcgtcgacttttgtgtagttgacctcgag
agacaggggcaaggtcaggttgtaacttgttctggagcatttaaggatggttctcttcgc
gtagttcgcaatgggataggaatcaatgaacaggcctctgtggaacttcaaggtatcaaa
ggaatgtggtcattgaaatcttcaattgatgaagccttcgacactttccttgtagttagc
tttatcagtgaaactcgtatattagccatgaatcttgaggatgaactggaagaaacagag
attgagggcttcttatctcaagtgcagactttattttgccatgatgctgtgtacaatcaa
cttgtacaagttacctcaaattctgttagactagtcagttctacaactagagaattacgg
gacgagtggcataccccagctggattcgctgttaatgttgcaactgcaaatgccagccag
gttcttttggcaactggaggtgggcatttggtgtatctggaaattggagatggtaaattg
acggaagtgcaacatgcccttttggagtatgaagtttcctgccttgatataaatcctatc
ggcgataatccaaactacagtcagctagcttcagttgggatgtggacagatataagtgtg
agaatcttttcgctgccagaattgactcttattacaaaagagcaactaggaggggagata
attccccgatctgttcttctttgtgcattcgaagggatatcttacttgctctgtgctctt
ggagatggtcatcttttgaacttccagttggatacaactaccgggcagttaaaagacagg
aaaaaagtatcacttggaactcaaccaataactctgcgtacattttcatcaaaaagtgcc
acgcatgtctttgctgcatctgataggccaaccgtaatctatagcagcaacaagaagctg
ttatacagtaatgtcaatcttaaagaagttagtcatatgtgtcctttcaactctgctgct
ttccccgacagtttagcgattgcgagggaaggtgaacttacgattggcaccattgatgat
attcagaagcttcacatacgcacgattcctcttggagagcatgctcgtcgaatctgccat
caggagcagacgcgtacatttggtatctgcagtttaggaaaccagacaaatgctgaagaa
tctgaaatgcactttgtccgtcttttggatgaccagactttcgagtttatttcaacttac
cctctggattcttttgaatacggttgctccattctgagttgctctttcaccgacgataaa
aatgtctattactgtgttggaaccgcatatgttctaccggaggaaaatgaaccaactaag
ggaaggatattagtatttatagttgaagatgggaggctgcagcttattgctgagaaagaa
acaaaaggagctgtttattccctcaatgcctttaatggaaaacttcttgctgccattaat
cagaagattcagttgtacaagtggatgctgcgtgatgatggcactcgtgaactgcagtct
gaatgcggacatcacggtcacattctagctctctatgtacagacccgtggagactttatt
gttgttggtgatctcatgaaatcaatctccttattgttatacaagcacgaggaaggtgca
atcgaggagcgggctcgagattacaatgcaaattggatgtcagcggttgagatacttgat
gatgacatttacctcggtgctgagaacaatttcaatttgttaacagtgaaaaagaacagt
gaaggagctactgatgaagaacgagggcggttagaggtagttggagagtatcaccttggg
gaatttgtgaacagattccgccatggatctttagtaatgaggctacctgattcagagatt
ggtcaaatcccaaccgtcatctttggtacagtcaatggagtgattggagtaatagcttca
ctccctcaagaacagtatactttcttggagaagttgcagtcaagtttgaggaaagtgatt
aaaggagttggcggattaagccatgagcaatggaggtcgtttaataacgagaaaagaacc
gcagaagcaaggaatttcttggatggtgacttaatcgagtcgtttctagatctgagtagg
agcaagatggaggacatatctaaatccatgaatgttcaagtggaagagttgtgtaagaga
gttgaagaactcactaggcttcactga
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