Camelina sativa (false flax): 104737802
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Entry
104737802 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104737802
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104737802
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104737802
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104737802
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104737802
03009 Ribosome biogenesis [BR:
csat03009
]
104737802
03110 Chaperones and folding catalysts [BR:
csat03110
]
104737802
04131 Membrane trafficking [BR:
csat04131
]
104737802
03051 Proteasome [BR:
csat03051
]
104737802
03029 Mitochondrial biogenesis [BR:
csat03029
]
104737802
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104737802
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104737802
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104737802
Complex C
Prp19-CDC5 complex
104737802
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104737802
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104737802
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104737802
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104737802
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104737802
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104737802
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104737802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104737802
NCBI-ProteinID:
XP_010456365
LinkDB
All DBs
Position
13:762446..766161
Genome browser
AA seq
931 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDASVQSDRKLWPFTIISSGTAEKPMIVVNYKGEEKQFS
AEEISSMVLIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINE
PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKSKQDITGLARPLRRLRTACERAKRTLSSTAQTTIEIDSLYGGADL
FAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHEVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTL
IQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHK
KKVEAKNALENYAYNMRNTIRDEKIGEKLPAAEKKKIEDSIDEAIQWLEGNQLAEADEFE
DKMKDEKCLRDAKMDKSSVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYG
AAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFSTYS
DNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAED
KTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT
IRDEKIGEKLPAAEKKKIEDSIDEAIQWLEGNQLAEADEFEDKMKELEGVCNPIIAKMYQ
GGAGGPGAAGMNYDEAPPASGGAGPKIEEVD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaagggagaaggtcctgcgatcggtatcgatcttggtaccacctactcttgt
gttggagtgtggcaacacgaccgtgttgagatcattgctaatgatcaaggtaaccggacc
acgccgtcttacgtcgctttcaccgacaccgagaggctgatcggagatgctgctaagaac
caggtcgccatgaaccctgttaacactgtcttcgatgcaaagaggttgattggtcgtaga
ttcagtgacgcatctgtccaaagcgacaggaagttgtggcctttcaccatcatctcttca
ggaactgctgagaaaccaatgatcgtagtcaactacaagggtgaagagaaacagttttcc
gctgaggagatctcttccatggttctcattaagatgcgtgagattgctgaggcctacctt
ggcaccactatcaagaacgctgtggtcaccgttcctgcttacttcaatgactctcagcgt
caagccacaaaggatgctggtgtcattgctggtttgaatgttctgcgtatcatcaacgag
cccactgctgctgccattgcctacggtcttgacaagaaggccaccagcgttggagagaag
aacgttctcatctttgatcttggtggtggtactttcgatgtctctcttcttacaattgaa
gaaggtatctttgaggtcaaggccactgctggagacactcatcttggtggtgaagatttc
gataacagaatggttaaccactttgttcaagagtttaagaggaagagcaagcaggacatc
actggcctcgcaagaccccttaggaggctgagaacagcttgcgagagagcaaagagaact
ctttcttccacggcgcaaacgaccatcgagattgactctctctatggaggagctgacctc
tttgctccaattacccgtgctagattcgaagagcttaacatggatcttttcaggaagtgt
atggagcctgttgagaagtgtctccgtgatgctaagatggacaagagctcagtccatgaa
gttgttcttgtcggtggttccacccgtatccccaaagttcaacagcttctccaagatttc
ttcaatggtaaagagctctgcaagtctatcaaccctgacgaggctgttgcatacggtgca
gccgtccagggagctattctaagcggtgaaggaaacgaaaaggttcaagaccttctcttg
cttgatgtcactcctctctccctcggtcttgaaactgctggtggtgtcatgaccactttg
attcagagaaacacaaccatcccgaccaagaaggagcaggtcttctccacttactcagac
aatcagcccggcgtgttgatccaggtgttcgaaggtgagagagccagaaccaaggacaac
aaccttctcggtaaattcgagctctccggaatccctccggctccacgtggtgtgcctcag
atcaccgtctgctttgacattgacgcaaatggtatcctcaacgtatctgctgaggacaag
accaccggacagaagaacaagatcaccatcacgaatgacaagggtcgcctttctaaggat
gagatcgagaagatggttcaagaagcagagaagtacaagtctgaggacgaggagcacaag
aagaaggttgaagccaagaacgctcttgagaactacgcttacaacatgaggaataccatc
cgtgatgagaagatcggtgagaagcttccagctgcagaaaagaagaagattgaggactcg
attgacgaagcaatccaatggcttgagggtaaccaattggctgaagctgacgagtttgaa
gacaagatgaaggatgagaagtgtctccgtgatgctaagatggacaagagctcagtccat
gaagttgttcttgtcggtggttccacccgtatccccaaagttcaacagcttctccaagat
ttcttcaatggtaaagagctctgcaagtctatcaaccctgacgaggctgttgcatacggt
gcagccgtccagggagctattctaagcggtgaaggaaacgaaaaggttcaagaccttctc
ttgcttgatgtcactcctctctccctcggtcttgaaactgctggtggtgtcatgaccact
ttgatccagagaaacacaaccatcccgaccaagaaggagcaggtcttctccacttactca
gacaatcagcccggcgtgttgatccaggtgttcgaaggtgagagagccagaaccaaggac
aacaaccttctcggtaaattcgagctctccggaatccctccggctccacgtggtgtgcct
cagatcaccgtctgctttgacattgacgcaaatggtatcctcaacgtatctgctgaggac
aagaccaccggacagaagaacaagatcaccatcacgaatgacaagggtcgcctttctaag
gatgagatcgagaagatggttcaagaagcagagaagtacaagtctgaggacgaggagcac
aagaagaaggttgaagccaagaacgctcttgagaactacgcttacaacatgaggaatacc
atccgtgatgagaagatcggtgagaagcttccagctgcagaaaagaagaagattgaggac
tcgattgacgaagcaatccaatggcttgagggtaaccaattggctgaagctgacgagttt
gaagacaagatgaaggagttggagggtgtttgtaatccgatcatcgctaagatgtaccaa
ggaggagctggtggtcctggagctgctggaatgaactacgatgaagctcctcctgcctca
ggtggtgctggccccaagatcgaggaagtcgactaa
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