KEGG   Camelina sativa (false flax): 104738129
Entry
104738129         CDS       T05044                                 
Name
(RefSeq) WD repeat-containing protein RUP2-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
csat  Camelina sativa (false flax)
Pathway
csat04120  Ubiquitin mediated proteolysis
csat04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104738129
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    104738129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csat04121]
    104738129
Enzymes [BR:csat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104738129
Ubiquitin system [BR:csat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104738129
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104738129
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C EIF3I Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR75_1st YNR034W-A-like WD40_like
Other DBs
NCBI-GeneID: 104738129
NCBI-ProteinID: XP_019090219
LinkDB
Position
13:10851465..10854110
AA seq 370 aa
MNTLHPYKQQRQEQEQEQEQEARHEWDLSLSTVVSSSSSSASDVIGAIEFDPTDNIVATA
GISRKIRFYGLPSLLRTSAAVSGGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGS
GDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRHGDSSAIGASGSDDGTMQVWDPRC
PPEESLGLVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYIYDMRKLVDPALTLQGHN
KTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGSVIRTYEGHVNGRNFVGLSVWRNGALFGC
GSENNKVFVYDKRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGV
LQVYVGKRKP
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaacactcttcatccttacaagcagcaacgacaagaacaagaacaagaacaagaacaa
gaagctagacacgaatgggatctttctctctccaccgtcgtttcttcctcctcctcctcc
gcctccgacgttatcggtgctattgagttcgatcccactgataacatcgtcgctacagcc
gggatttctagaaagattcgtttttacggcctcccttccctcttacgtaccagcgccgcc
gtctcaggaggagtttctttcgtcgatcaagccaccgcctgcgagtattacatctgtacg
ccggcgaagctcagtagtctacggtggagacccgggtcgggtggtcgggtcatcgggtcg
ggagattacgacggtgtagtgaccgagtacgatctcgagaagagaacgcccgtgttcgaa
agggacgagcacggtggccgacgcgtgtggagcgttgattacacgcgtcacggcgactcg
tccgccataggcgcgtctggatcggacgacgggaccatgcaagtgtgggatccgaggtgt
ccaccggaggaatctttaggcctcgtacggccggcggggatatgccggagcgccgtttgt
tgcgtcgagttcgatccttccggcggaccagctgtggctgtcggctgcgctgatcggaaa
gggtacatttacgatatgagaaaactcgttgacccggcgttgactctgcaaggacataac
aaaacggtgtcgtatgtgaggttcctcgacggtggtacggtggtgacggcaggcacggac
ggatgtctgaagctgtggagcgtggaggacgggagcgtgattcggacgtacgaagggcac
gtgaacggtagaaacttcgtggggttatcagtgtggagaaacggcgcgctgtttggttgt
ggatcggagaacaacaaggtgttcgtgtatgataagaggtggggaaagccggtatgggta
gacgggttcgaaccggttggtatgaattctggttcggataagcggttcgtgagtagcgtc
tgctggaggcaatcaggtgtggaccagtgcacgctagtggctgggggatctgatggagta
ttacaggtttacgtgggcaaaagaaagccataa

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