Camelina sativa (false flax): 104738193
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Entry
104738193 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104738193
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104738193
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104738193
03036 Chromosome and associated proteins [BR:
csat03036
]
104738193
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104738193
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104738193
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104738193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
104738193
NCBI-ProteinID:
XP_010456709
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All DBs
Position
13:complement(12756463..12758042)
Genome browser
AA seq
471 aa
AA seq
DB search
MFKQFLSKLPRKSSKSESGGGELNRSSSGQVPSPVQRSGAGSGVGSGPVRSNSGKRMSSA
VFPASVVAGIEPLVPFKDVPTSEKLNLFVSKVSLCCVTFDFSDPGKNSIEKDVKRQTLLE
LLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSSGGGGGGENDDDEPMFDPAWPH
LQIVYDLLLKFITSPCLDAKLAKKYLDHAFIVRLLDLFDSEDPRERECLKTILHRVYGKF
MVHRPFVRKSMSNIFYRFVFETEKHSGIAELLEIFGSIVSGFALPLKEEHKIFLWRVLIP
LHKPKSVGNYFQQLSYCITQFIDKEPKLGSVVIKGLLKFWPITNSQKEVMFLGEVEEILE
AMSVMEFQKIMVPLFLRIACCVTSSHFQVSERALFLWNNDQIVNLIGHNRQAILPIMFTA
LEKNAQDHWNQSVLNLTLNVRKMFCEMDEALFMSCHSRFKEDEAKQCSAAE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcagtttctgagtaagcttcctcggaagtcttcaaaatctgagtctggtgga
ggagagctgaatcgttcgagttccggtcaggttccttctccggttcagagatccggagct
ggtagtggtgttggttctggtccggttcgatctaactcagggaaacgtatgtcatctgct
gtgttcccagctagtgttgttgctgggattgagcctttggtaccgttcaaggatgtacca
acctcggagaaattgaatctctttgtgagtaaagttagtttatgctgtgtgacatttgat
ttctccgaccctggtaaaaactctattgagaaagatgtgaaaaggcagaccttgttggag
cttcttgattttgttgcttcaggttctgttaagtttactgagccagctattctcgccatg
tgtagaatgtgtgctgtgaatctctttagggttttccctcctaattaccggtctagtggc
ggcggtggtggcggcgagaacgatgatgatgagccaatgttcgaccctgcttggcctcat
ttgcaaatcgtctatgatttgctgcttaagtttatcacttcaccttgtcttgatgctaag
ttggcaaagaagtatcttgatcatgctttcattgtcaggttgcttgacttgtttgattcc
gaggatcctagagaacgggagtgtttgaagacgattctgcatcgtgtgtatggtaaattc
atggttcacaggccctttgtacgcaagtccatgagcaatatattctaccggtttgtgttt
gagactgagaagcatagcggtatcgctgagcttttggagatttttgggagtatagtgagc
gggtttgctttgcccttgaaagaagagcacaagatcttcttgtggagagtgttgattcca
ttgcataagcctaaatctgttggaaactacttccagcagctatcttactgcatcactcag
ttcatagataaggagcctaaattgggtagtgttgtgataaaaggtttattgaagttctgg
cctatcacaaacagccaaaaggaagtcatgtttcttggggaggtcgaagagattttagaa
gcaatgagtgtgatggaattccaaaagattatggtccctctcttcttgcggattgcttgt
tgtgtaaccagttcccactttcaggtttctgaaagagctttattcttgtggaacaatgat
caaattgtgaacttgattggacacaaccggcaagccatcttaccaatcatgttcactgcc
ttagaaaagaatgctcaagaccactggaaccaatccgtactaaacttaaccttaaacgta
agaaaaatgttctgtgaaatggacgaggctctgttcatgtcttgccactcccgctttaag
gaggacgaagcaaagcaatgttctgcagcggaa
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