Camelina sativa (false flax): 104738228
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Entry
104738228 CDS
T05044
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104738228
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104738228
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104738228
Protein phosphatases and associated proteins [BR:
csat01009
]
HAD phosphatases
Fcp/Scp phosphatases
104738228
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104738228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
104738228
NCBI-ProteinID:
XP_010456737
LinkDB
All DBs
Position
13:13960442..13963153
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AA seq
622 aa
AA seq
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MEANHPKDEAYLSAVIPKRTKQIQANQLESLPHDPIKMTSPDGNVKEGKKRETTPIDDQV
IAINDAVHKLQLAMLDGITEQNQLFAAGKLISRLDYEDVVTERTIAKLCGYPLCQRFLPS
DVSRRGKYRISLKEHKVYDLQETGKFCSAGCLIDSKTFSGTLQDARTSEFDSLKLNEILA
LFGDPEVKGSLDVNKDLDLSKLVIRENFEARGGELSLEQWMGPSNAVEGYVPLDLSDCNS
RNCKDISDSKATQKNQEKHENPPFSEMDSTSTVIMPDEYSVSKLLPQTKHASPVGESDDG
KGKTVMGEQTVVPPTQKKSRFLRVKEKEKKSFGVDGIDFASFGFDRMGCVSSGTGSDGHS
VEYSVSKQPPCSTKDPMGGQLKKDHKTLDGKSSLTGSSSASKKKSLKLPTQAKQATHGGE
SEDGKMKTVMKNFGQTAVPPRKKLGFCNDPEIEKDIKNFGFDEMGLASSAIMSDGYGVEY
SVSKQPQCSMEDSLSCNLKGGLQTLDGKSTLSGSSSGPNTKGSRTKPEKSGKKKISVEYH
ANSYEDGEENLAADLSEIHKVQDVCSSSETVTTSCLKTSGCKKLSRSVTWADQNDGCGDL
CEVRNKDIAAGPSLSSTDTKDV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaatcatccaaaggatgaagcgtatctttccgcagtcatccccaaacgtacc
aagcagatccaagccaatcaactcgagtctctaccacacgatccaatcaagatgacatcg
ccagatgggaatgtgaaagaaggaaagaaacgtgagacaactccaatagatgatcaagta
atcgccattaacgatgcggttcacaagcttcagctcgctatgctcgacggtatcactgag
cagaaccagctcttcgcggcggggaagttaatttctcgattagactacgaagatgtcgtc
actgaacgaaccatcgctaagctatgtggttatcctctttgccagagatttctcccttcc
gatgtttctagaagaggaaagtatcggatttcgttgaaggagcataaggtttacgattta
caggagacgggaaagttttgctccgcgggttgtttgattgatagcaaaacgttttcgggg
actttgcaagatgctcgtacctcggagtttgattcgctgaagttgaatgagattttggcg
ttgtttggtgatccggaagtgaaaggttctttggatgtgaataaggatttagatttgtct
aagcttgtaattcgggagaattttgaagcgagaggtggagaattgtctttagagcagtgg
atgggtccttctaatgctgttgaaggttatgttcctttggatctaagtgattgcaattca
agaaattgcaaagacataagtgattccaaggctactcaaaagaatcaagagaagcatgag
aacccgccttttagcgagatggattccactagcacagtaattatgcctgatgaatatagt
gtttcaaagcttctaccgcaaaccaaacatgcttctcctgttggggaatctgatgatggc
aaagggaaaacagttatgggggagcaaactgtagttcctcccacacaaaagaaatcaagg
tttcttcgtgtaaaagaaaaggaaaagaagtcgtttggggttgatgggatcgattttgcg
agctttgggtttgataggatgggttgtgtgagctctggtactggaagtgatggacacagc
gttgaatatagtgtgtctaagcaaccaccatgctcaacaaaagaccctatgggtggtcaa
ttaaaaaaggatcataagactttggatggaaaaagttctctaacaggatcctcttctgca
tctaagaagaaaagtttgaagcttccaacacaagccaaacaagctactcatggaggggaa
tcagaggatggcaaaatgaaaacagttatgaaaaattttggacaaactgcagttcccccc
aggaaaaaattgggtttttgtaatgatcctgaaatagagaaggacattaagaatttcggg
tttgatgagatgggtcttgcgagttcggctattatgagtgatggatacggcgtagaatat
agtgtgtctaagcagccacaatgttcgatggaagattctcttagttgcaatctaaaaggc
ggtcttcagactttggacggaaaaagtactctatcaggatcctcttctggtcctaatacg
aagggctcgaggacaaaaccagaaaaatcaggaaagaaaaagatttctgttgaataccat
gctaattcttatgaagatggtgaagaaaaccttgcagctgatttgtccgaaatacacaaa
gttcaggatgtgtgttcatcaagtgaaaccgttacaacgtcatgccttaaaacttctggt
tgtaagaagcttagccgttcggttacttgggccgaccagaatgatggctgtggtgatctt
tgtgaggttagaaacaaagatatcgccgcaggtcctagcctgtcttctactgatacaaag
gatgtc
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