Camelina sativa (false flax): 104738528
Help
Entry
104738528 CDS
T05044
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104738528
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104738528
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104738528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
DEXQc_Suv3
AAA_19
UvrD-helicase
Helicase_PWI
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
104738528
NCBI-ProteinID:
XP_010456995
LinkDB
All DBs
Position
2:25558008..25570583
Genome browser
AA seq
2083 aa
AA seq
DB search
MLVQIPRLTSSLREPFDIDQAYLRRKTILQTLNKPRSSGNRLDESDLARRIVHQWEGASP
EVRQAYKQFTGAVVELIDREVPSDEFREVAFAAYRLFGKPVEEDSDIDDNKTIAEKKLEL
QNLVGHAVSDANVKNVASLARALYSIQPTHQSEEYTNEVDGGAEFGADLVFNLPARFLVE
DVDEKGFQDVESNDTCASFSEGWSDVSNMTKNLSAGKFDLSWLRDACGQMVRETNSQLSR
EELAMAICRFLDSDKPGEEIAGDLLDLVGDSAFETVQDLIMHRKEIVDAIHHGQMVLKSD
KTASNAQSRMPTYGTQVTVQTESAKQIEKLRRKEEKKNKRNAELGLESELSEANFSSLLE
ASEKKTAFEDLIGSGEANSLALALPQGTVRKHLKGYEEVFIPPTPTAQMKPGEKLIEIKE
LDDFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHFR
DGYLHKNEFKIVYVAPMKALAAEVTSAFSRRLAPLNMVVKELTGDMQLTKTELEETQMIV
TTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVESTQTMIR
IVGLSATLPSYLQVAQFLRVNPDTGLFYFDSSYRPVPLAQQYIGITEHNFAARNVLLNEI
CYKKVVDSIKQGHQAMIFVHSRKDTSKTAEKLVDLARQYENLDLFVNETHPQFQLMKKDV
MKSRNKDVVKFFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHTV
VIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQ
LPIESQFISSLKDNLNAEVVLGTVTNVKEACAWLGYTYLSIRMKLNPLAYGVGWDEIIAD
PSLSLKQRALVADAARSLDKAKMMRFDEKSGNFYCTELGRVASHFYIQYSSVETYNEMLK
RHMNESEIIDMVAHSSEFDNIVVREEEQNELETLARSCCPLEVKGGPSNKHGKISILIQL
YISRGSIDAFSLVSDASYISASLARIMRALFEICLRKGWCEMTLFMLEYCKAVDRQLWPH
QHPLRQFDRELPFDTLRKLEERGADLDRLYEMEEKDIGALIRYNPGGRLVKQHLGYFPSI
QLEATVSPITRTVLKVDLLITPDFIWKDRFHGAALRWWILIEDTENDYIYHSDLFTLTKR
MARGEPQKLSFTVPIFEPHPPQYYVHAVSDSWLHAESFFTISFHNLTLPEARTSHTELLD
LKPLPVTSLGNRLYESLYKFSHFNPIQTQIFHVLYHTDNNVLVGAPTGSGKTISAELAML
RLFSTQPDMKVVYIAPLKAIVRERMNDWKKHLVAPLGKEMVEMTGDYTPDLVALLSADII
ISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGADRGPILEVIVSRMRYISSQTERSV
RFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPIEVHIQGYPGKYYCPRMNSMNKP
AYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSVSEEDLQMVLSQIT
DQNLRHTLQFGIGLHHAGLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKG
TEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVE
SSLKEKLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETVCSYL
SRLVQNTFDDLEDSGCLKVNENSVEPMMLGTIASQYYLCYMTVSMFGSNIGSDTSLEAFL
HILAGASEYDELPVRHNEENYNKTLSDKVRYPVDNNHLDDPHVKANLLFQAHFSQLALPI
SDYNTDLKSVLDQSIRILQAMIDICANSGWLSSSLTCMRLLQMVMQGMWSDQDSSLWMIP
CMNDDLLGSLTARGIHTLHQLLEIPKETLQSVTGNFPASRLSQDLQRFPRIRMNVRLQKK
DSDGKKMPSMLEIRIEKISKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFT
GRLTTRMELPPNISSFQNTKLILVSDCYLGFEQEHSIEQPARR
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagattcctcgcttgacaagctctctcagagagccattcgatatcgatcag
gcttaccttcgccgcaaaactatactccaaactcttaataagcctcgcagctctgggaat
cgtcttgatgaatctgaccttgctaggaggatagttcatcaatgggaaggagcttctcca
gaagtgcgacaagcatacaaacagtttactggagctgtggtggagttgattgatcgggaa
gttccatctgatgagttccgtgaggttgcttttgctgcttaccgtctgtttggcaagcca
gtggaggaggacagtgatatcgatgataataaaaccattgccgaaaagaagttagagttg
caaaatcttgtcggtcatgctgtatcagatgctaatgttaaaaacgtggcctccttagct
cgggcactttactcaatacagcctacgcatcagtctgaggaatacactaacgaagttgat
ggaggagctgagtttggtgccgaccttgttttcaatctaccagctcgttttctggtggag
gatgttgacgaaaaaggatttcaagatgtggaaagcaatgacacttgtgcgtcattttct
gaaggatggagtgatgtcagcaacatgacaaagaatctaagtgcaggaaaattcgattta
agttggctaagagatgcatgtggacaaatggttagagaaaccaattcacaactttcccgt
gaagaactggctatggctatatgcaggtttctggattccgataaacctggtgaggagata
gctggggatctgctggatcttgttggagatagcgcatttgagactgttcaagaccttatt
atgcatcggaaagagattgttgatgctattcatcatggtcaaatggttctcaaatctgac
aaaacagcttcaaacgcccaatctcggatgccaacctatggcacacaggttactgtccaa
acagagtctgcaaagcaaattgaaaaacttcggcgtaaagaggaaaagaaaaacaaacga
aatgctgagcttggtttagagagtgaactatcagaggccaatttttcttctttacttgag
gcaagtgaaaagaagactgcatttgaggatttgatcggttctggagaagcgaattctctt
gcattggcccttcctcaaggtactgtaaggaagcacttaaaaggatatgaggaagtcttt
atcccgccaacccctactgcacaaatgaaacctggcgagaagctgattgagataaaagag
ttagatgacttcgctcaagctgcttttcatggttacaagtccttaaaccgtattcagagt
cgcatatttcagacagtttaccacaccaatgagaatatattggtctgtgctccaacagga
gctggtaaaacgaatatagctatgatttctgttctacatgagatcaaacaacacttcagg
gatggatacttgcacaaaaacgagtttaagattgtttatgtagctcctatgaaggcttta
gcggcagaggtcacgtcagcatttagccgtcgtctggctccattaaatatggttgtgaag
gagcttacaggggatatgcaactcacgaagactgaacttgaagagactcagatgatagtg
acaacaccagagaaatgggatgtcattactcgcaaaagcagtgacatgtcattgtcaatg
ctagtaaaactattgatcattgatgaagtgcatcttctgaatgatgacagaggtgcagtg
atagaggccctagttgctcggaccctccgtcaggtggagtcaacacagacaatgataaga
attgtaggcctgtcagccactttacctagctacctacaggttgctcagtttctacgagtg
aatccagacacgggcctcttctattttgattcgagttatcgcccagttcccttagctcaa
cagtacataggcatcactgagcataactttgctgctagaaacgtattgttaaacgagata
tgctacaaaaaggttgttgattcaattaaacaaggtcatcaagcgatgatttttgttcat
tcccgaaaagacacttcaaaaacagctgagaaactggttgatcttgcccggcaatatgaa
aatctggatttgttcgttaatgagactcatcctcaatttcaactgatgaagaaagacgtt
atgaagtccagaaataaggatgttgtcaaattctttgaagctggcttcggaattcatcat
gctgggatgttgcgatctgatagaacacttacggagaggctgttttctgatggtctctta
aaggtgcttgtttgcactgcaactcttgcgtggggtgttaatctgcctgcacacacagtc
gtaattaagggaactcaattgtatgatgccaaggctggtgggtggaaagacttgggaatg
cttgatgtcatgcagatctttggaagggctgggagaccacagtttgataagagtggtgag
ggaattatcatcacatcccatgacaagctagcatactatctccggctgctgacgagtcag
cttcccatagaaagtcagttcataagctccttgaaagataatttgaacgcagaagtggtt
ttgggaactgtgactaatgtaaaggaagcctgtgcttggcttggatatacatatttgtca
attcggatgaagttaaatcctttggcttatggcgttggatgggacgagataattgccgat
ccttctttatcgctgaagcaacgagcccttgtggctgatgctgcacgttcactggacaaa
gctaagatgatgaggttcgacgagaaaagtggaaatttttactgtaccgagcttggacgg
gttgcaagtcacttctatattcaatattctagtgttgaaacatacaacgaaatgttgaag
cggcacatgaatgaaagcgagataattgatatggttgcccattcttctgaatttgacaat
attgtggtaagagaggaagagcagaatgagcttgagactcttgcacgctcttgctgtcct
ttagaagttaagggaggaccttctaacaaacatggaaaaatctcaattcttattcagttg
tacatatcccgtggatcaattgatgccttttctctggtctctgatgcttcatacattagt
gctagtttagcacgtataatgcgtgctctgtttgagatatgcttgcgcaaaggctggtgt
gagatgactttatttatgttggaatactgcaaggcagttgatcgtcaactatggccccat
cagcatcctcttcggcaattcgatagggaactaccttttgatacattaagaaaacttgaa
gagcgaggggctgacttagaccgtctgtatgagatggaggaaaaagacattggagcgttg
attcgttacaaccctgggggaaggttggtcaagcagcatctaggatattttccttcaatt
cagttggaagctactgttagtccaattacacgcactgtattgaaggtggatttgcttata
actccagatttcatatggaaggatcgttttcatggtgctgctcttcgttggtggattctc
attgaggacacagagaatgattatatctaccactcagatcttttcacactaacgaagcgg
atggctagaggggaaccgcagaagctttcttttactgtgccgatatttgaaccacatcca
cctcaatactatgttcatgcggtttctgattcttggttgcatgcagaatctttcttcaca
atctctttccacaatcttacactaccagaggcacgaacgtctcacacagagcttttagac
ttaaagcctctccctgtgacttctcttgggaatagattatatgaatcgctttacaaattt
tcgcattttaatccaatacagactcagatttttcatgtgttatatcacacagacaacaat
gttcttgtaggagctccaactggaagtgggaaaactatatctgctgaacttgcaatgttg
cgtctcttcagtacccagcctgatatgaaggttgtttacatagcaccactgaaggctatt
gttcgagaaaggatgaatgattggaaaaagcatcttgttgctccacttggaaaagaaatg
gttgaaatgactggagattacactccagatttagtagctctcttgtccgcagatatcatc
atatctacccctgaaaaatgggatggcattagtcgtaattggcatactcgaagttatgtc
aaaaaggtcggccttgttattttggatgagattcacttgcttggagccgacagaggaccc
atacttgaggttattgtgtctaggatgagatatatatcatcacagacagagcgctccgtc
cggtttgttggtctttcgacagctctggcaaatgcaggtgatttggctgactggttgggt
gtcggggagatcggacttttcaattttaaaccaagcgtcaggcctgtaccaattgaagtt
catattcagggttatcctggaaagtactactgcccaaggatgaatagcatgaacaagcca
gcatatgcagccatatgtacccattcacctacaaaacctgttcttatttttgtttcatct
cgtagacagacaaggcttaccgcactggatctaattcagtttgctgcctccgacgaacat
ccccggcaatttctgagtgtgtcagaggaagacttgcagatggtcctctcacagataact
gaccagaaccttcgacatacattgcaatttggcatcggattgcatcatgcaggtttaaac
gaccacgatagatctgcagtagaagagcttttcacgaacaacaagattcaggttttggtc
tcaacaagtaccttggcatggggagtgaacctaccagctcacttagttattataaaggga
acggaatattttgacgggaaaaccaaaagatatgttgacttccctcttactgagatcttg
caaatgatgggacgtgcagggcgtccgcaattcgaccaacatgggaaagcggtcattctt
gtacatgaacctaaaaagagtttttacaaaaagttcttgtacgaaccattccccgtagaa
agtagcttgaaagagaagctgcacgatcacttcaacgcagaaatagtatctggaacaata
ggcaacaaagaagatgcagtgcattatcttacatggacgtatttgttccgtagactgatg
gctaatcctgcttactatgggctagaaggtactcaagacgaaacagtctgttcctactta
tcaagattggtgcagaacacatttgatgatcttgaagacagtggatgcctcaaagtaaat
gaaaatagtgtggagcctatgatgctgggtacaatagcgtcacagtattacctttgctac
atgaccgtgtctatgtttggctctaatataggttctgacacatcgcttgaggcatttttg
catatcttggctggtgcttctgagtatgatgaacttcctgtgcggcacaatgaggaaaat
tacaacaaaacactgtcagataaagttcggtatcccgtggataataaccatctagatgat
cctcatgtcaaagcgaatctgctcttccaggcacatttttctcagttggcactcccaatc
agtgattataacacggatttaaagtcagtactggatcaaagcattcggatcctccaggcc
atgattgatatctgcgcaaacagtggatggctctcaagctcgctgacgtgtatgcgcctt
ttgcaaatggtcatgcagggtatgtggtccgatcaagattcgtcattatggatgatccca
tgcatgaatgatgatcttctaggatctctgaccgcaagaggaattcacacgctgcatcag
ctattagagattccaaaggaaactctacaaagtgtaaccggaaacttccctgcatcaaga
ttatctcaggatctccaacgatttccacggatccgaatgaatgtgagactccagaagaag
gattctgatggcaaaaaaatgccttcaatgctggaaatcagaattgagaagatatcaaag
aggaatagctcaagggcgttggcccctcgattcccaaaggtgaaagacgaagcctggtgg
ttggttcttggtgatacttcaacttctgagctctttgctgtgaagagggtttcgttcact
ggtcgcctgacgacacgtatggagttacctcccaatatatcctctttccagaatacgaaa
ctcatcttggtttcggattgttatttggggtttgagcaagaacactccattgaacaacca
gcacggcgctga
DBGET
integrated database retrieval system
