Camelina sativa (false flax): 104738822
Help
Entry
104738822 CDS
T05044
Name
(RefSeq) general transcription factor IIE subunit 1-like isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104738822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104738822
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
104738822
Prokaryotic type
Archaeal type
TFE
104738822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
wHTH-PRTase_assc
A24_N_bact
DZR
Motif
Other DBs
NCBI-GeneID:
104738822
NCBI-ProteinID:
XP_019091957
LinkDB
All DBs
Position
14:1079158..1085422
Genome browser
AA seq
472 aa
AA seq
DB search
MDKSGPVQKTVVIQPFVKLVRLVARAFYDDYTTKSDNQQKSAKSDNRGIAAVVLDALTRR
QWVREEDLAKDLQLHAKQLRKIIRLFEEQKLIMRDHRKETAKGVKMYSAAVAATSDGRAE
DKVKLHTHSYCCLDYAQISDVVRCKLHRMKKKLKDELEDKNTVQEYGCPNCQRKYNALDA
LRLISMLDDSFHCENCNSELVVECNKLTSEEVVDGDDNGRRRRREKLKDMLQKLEAQMKP
LVDQLDRIKDLPIPEFGSFLAWEARAAMAARANGDLNPNDPLRSQGGYGSTPMPFLGETK
VEVNLGDGNEDVKSKGGDSSLKVLPPWMIKQGMNLTEEQRGEMRQEAKVDGGSGGAAKLS
DDKKSAIGNGDEKDIKDEYLKAYYAELLKQQELAARLNQQESAGELTPDIQLATTSPGRE
VGKKSKREEDDVEWEEEAPVAANGNYKVDLNVEAEASGGEEEEEDDVDWEEG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcaggcccggtgcagaaaactgttgtgatccagccatttgtcaagttggtg
aggcttgtagcgagagctttctatgatgattatactacgaaaagcgataatcagcagaaa
tctgcaaagagtgacaaccgagggattgccgctgtggtgcttgatgcgctgaccaggcgg
cagtgggttagagaagaagacttggcaaaagatttgcagttacacgccaagcaacttcga
aaaattataagactctttgaagaacaaaaattgattatgcgtgaccaccggaaagagact
gcaaagggtgtaaagatgtatagtgctgcagtggctgccacaagcgatggccgagcagag
gacaaagttaagctccacacccactcgtattgttgtctcgattatgcacagatatctgat
gttgttcgttgtaaactgcaccggatgaaaaaaaagctcaaagatgagctagaagataag
aatactgttcaggagtatggctgtcctaactgccaaaggaaatataatgcgctggatgct
ctgagattaatttctatgctagacgattcttttcattgtgaaaattgcaatagtgaactt
gttgtggagtgtaacaagctaacttccgaagaagtagtagatggagatgataatggaagg
agacgacggcgggaaaaactaaaagatatgcttcagaagttggaggctcaaatgaaacct
ctggtggatcaattagacagaataaaagatctacctattcctgaatttggatcttttctg
gcatgggaggctcgtgcagctatggctgctcgcgcaaatggtgatcttaaccctaatgat
cctttgaggtcacagggtgggtatggttcaacaccaatgccatttctcggagagacaaag
gttgaggttaaccttggcgacgggaacgaggatgttaaatctaaaggtggagattccagt
ttgaaagtcttgcctccatggatgattaagcaaggaatgaatctgactgaggaacaaaga
ggtgaaatgagacaagaagcaaaggttgatggtggttcaggaggagcagcaaaactttca
gatgacaagaaatcagccattggaaatggcgatgaaaaggatataaaggatgaatatctc
aaagcttactacgccgaactgctgaagcagcaagagcttgctgcaaggcttaatcaacaa
gaatccgctggtgaattaactcctgatattcaattggctactacatccccaggtcgcgag
gttggtaagaagtccaaacgtgaagaggatgatgttgaatgggaagaagaggctcctgtt
gcagctaatggaaactacaaggtggacttgaatgtggaagcagaagcctcgggtggtgaa
gaagaagaggaagatgacgtcgactgggaagaaggctga
DBGET
integrated database retrieval system
