KEGG   Camelina sativa (false flax): 104738826
Entry
104738826         CDS       T05044                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104738826
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104738826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104738826
   03041 Spliceosome [BR:csat03041]
    104738826
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104738826
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104738826
Spliceosome [BR:csat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104738826
 Complex C
  U2 snRNP components
    104738826
SSDB
Motif
Pfam: LSM SM-ATX DUF1256 DUF150_C
Other DBs
NCBI-GeneID: 104738826
NCBI-ProteinID: XP_010457337
UniProt: A0ABM0VJW7
LinkDB
Position
14:complement(1096378..1097701)
AA seq 93 aa
MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTKVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPKDGVDVDLLHDAARREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttttcttacttcaaggatttggttggacaagaagtgacggttgagctcaag
aacgatttagctatcagaggaactcttcactcagttgatcagtatctgaacatcaagctc
gagaatactaaggttgttgaccaggacaagtacccacacatgctttcagtgagaaactgt
ttcatcagaggatccgtggtaaggtacgtgcagttacctaaagatggagtcgatgttgat
ttacttcacgatgccgctagaagagaagctaggggtggctga

DBGET integrated database retrieval system