Camelina sativa (false flax): 104738854
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Entry
104738854 CDS
T05044
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104738854
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104738854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
SbcC_Walker_B
YwqH-like
AAA_21
ABC_tran
TRP_N
Rrn6_HB
Feld-I_B
ApoO
Motif
Other DBs
NCBI-GeneID:
104738854
NCBI-ProteinID:
XP_019093327
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All DBs
Position
2:complement(25712844..25720144)
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AA seq
1060 aa
AA seq
DB search
MAKSGSRTRSSDSFIQQRSGSGTILRIKVENFMCHDNLQIEFGEWVNFITGQNGSGKSAI
LTALCVAFGCRAKGTQRAATLKDFIKTGCSYAVVHVEMKNQGEDAFKPETYGGVIIIERR
ITEATTSTVLKDFLGRKVSNRRDELRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDK
FKFFFKATLLQQVNDLLQSIYEHLNTATAIVDELENTIKPIEKEISELRGKIKNMEQVEE
IAQKLQQLKKKLAWSWVYDVDRQLQEQIEKIVKLKERIPTCQAKIDWELGKVESLRDRLT
KKKAQVACLMDESTAMKREIESFHQSAKTAVREKITLQEDFQHKCNHVQKIKDRVRRLER
QAVDINEQTMRSTQAEQSEIEEKLKYLEQEVEKVETLLSRLKDEENCFLEKALDGRKEVE
LIEDMIKNHQKRQRNVTSNINDMKKHQTNKVTAFGGDRVINLLQAIERHHRRFSKPPIGP
IGSHVTLVDGNKWASTVEQSLGNLLNAFIVTDHKDSLILRGCANEANYRNLRIIIYDFSR
PRLNIPRHMIPQTEHPTILSVIHSDNPTVINVLVDVSGVERQVLAENYEVGKAVAFGRRL
SNLKDVYTLDGYRMFFRGPVQTTLPPPQSRRPSRLCASFDEQIKDLEIEASLEQNEINQC
MRRKREAEENLVELELKMRTLKKHRSQAENVLTTKELEMQDLKNTVAAETEASPSSSVNE
LQLDIMKGREEIEEKEALLEKLQNCLEEAELKANKLTASFENLRESAKGEIDAFEEAENE
LKKIEKDLQSAEVEKIHYENIMKNKVLPDIKEAEANYEELKNKRKESDQKASQICPESEI
EALGPWDGSTPEQLSAQINRMNQRLHRENQQFSESIDDLRMMYESLERKIAKKRKSYQDH
REKLMACKNALDSRWGKFQRNASLLRRQLTWQFNAHLGKKGISGQIKVSYEDKTLSIEVK
MPQDATSNAVRDTKGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLD
ALVDFAIGQGSQWMFITPHDISMVKAHERIKKQQMAAPRS
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatctgggtctcgaactcgatccagtgattccttcatccaacagcgttctggg
tctggtacaattcttaggatcaaagttgagaatttcatgtgccatgataatctccagatt
gagtttggcgagtgggtcaatttcatcaccggccaaaacggaagtggtaagagtgcgata
ttgactgctctatgtgttgcatttggatgtcgagcgaaagggacacagcgtgctgctacg
ttgaaggatttcattaaaactggatgcagttatgctgttgtccatgtagaaatgaaaaac
caaggagaggatgcgtttaagcctgaaacttatggtggtgttataattatcgaacgcagg
ataaccgaggctactacttctaccgttctcaaagattttcttggaaggaaagtaagtaac
cgaagagatgagctacgagaacttgttgaacattttaatattgatgttgaaaacccgtgc
gtggtaatgagtcaagacaagagcagggagttcttacattctgggaatgacaaagataaa
tttaagttcttttttaaggcaacccttcttcagcaagtcaatgatcttctccaaagtatc
tacgaacacttgaatactgcaactgctatagttgatgaattggagaacacaattaaacct
atagaaaaggagatcagtgagttgcgtggaaagataaagaatatggaacaagtcgaagaa
atagctcaaaagttgcagcagttgaagaagaaactggcttggtcatgggtatatgatgtg
gataggcagctccaggagcagatcgagaagattgtgaagcttaaagaacgtataccgact
tgccaagctaaaatagattgggaactgggtaaagtggaatcgttaagggatcgcttgaca
aagaagaaagctcaagttgcatgtctgatggatgaatcaactgcaatgaagagggagata
gagagttttcaccaatcagccaagacggcagtacgggaaaagataactctacaagaagac
ttccaacataaatgtaatcatgttcaaaagattaaggatcgtgttaggaggcttgaacgg
caggctgtagatatcaatgaacagacgatgagaagcacacaggctgagcaatctgaaatc
gaggagaaactaaaatatttggagcaggaggttgagaaagttgaaacattgctttccaga
ttgaaagatgaagagaactgctttttggaaaaagcgttagatgggaggaaagaggtggaa
ctcatcgaggatatgattaaaaaccatcaaaagaggcaaagaaatgtaacctctaacatt
aatgatatgaagaaacatcaaacaaacaaggttactgcatttggaggggatagagtcatt
aatcttctgcaagctattgagagacaccatcgtcgattcagtaaaccaccaattggtcct
attggctctcatgtgactttggtcgatggcaataaatgggcatctacagttgaacaatct
cttgggaacctattaaatgccttcattgtgactgatcataaagattcgctcattctaaga
ggctgtgcgaatgaagccaattacagaaaccttaggattatcatctatgacttttcgaga
ccaaggctaaatataccaaggcacatgattcctcagaccgaacacccaaccattctctct
gtcatacactctgataacccaaccgtcattaatgttttggtggatgtgagtggtgttgag
aggcaagtgcttgcagagaattatgaggtgggaaaggcagttgcctttgggagaaggctc
tcaaatctgaaggatgtatacactttagatggataccgaatgttttttcgtgggccagtc
cagactactcttcctcctcctcaatctcgtagaccttcgcgactctgtgcttcttttgat
gaacaaatcaaggatcttgaaatagaggcctcactagaacaaaacgagattaatcaatgc
atgagacgtaagagggaggcagaggagaatctcgtggagcttgagctgaaaatgcgcaca
ctgaagaagcaccgcagccaagcagagaacgttttgacgacaaaggaactcgagatgcaa
gatttgaagaatacagtcgctgctgagaccgaagcatcaccttcttcaagtgttaacgag
cttcaacttgatatcatgaaaggtcgagaagagatagaggagaaagaagctttgcttgag
aagcttcaaaactgtttggaagaagctgagttaaaggctaataaacttacagcttcattt
gagaacttacgtgaatcagccaagggtgaaattgatgcctttgaggaagcagagaatgag
ctaaagaagattgagaaagaccttcagtctgctgaagtggagaaaattcattacgagaac
ataatgaaaaacaaggtcctacctgatattaaggaggctgaagccaattacgaggagctt
aaaaataaacggaaggaaagtgaccagaaggcatctcaaatttgtcctgagagtgagatc
gaagctttgggtccctgggatgggagtactcctgagcagctcagtgctcagattaataga
atgaatcagagacttcaccgtgagaatcagcagttttctgaatcaattgatgacctcagg
atgatgtatgagagcctagagcgaaagattgcaaagaagcgcaaatcctatcaagaccat
cgagaaaaactcatggcctgcaaaaatgctctagattcgcggtggggcaagtttcaaaga
aatgcatctcttcttcggcgccagttaacatggcaattcaatgctcacttgggaaagaaa
ggtatcagtggacaaatcaaagtcagttatgaggataaaactttatccatagaggttaag
atgcctcaagacgcaacaagcaatgcggttcgagataccaaaggtctttcaggcggagaa
cgttctttctcgactttatgttttgcactagcgcttcacgagatgacggaagccccattt
cgagcaatggatgagtttgatgtgtttatggatgcagtgagtcgaaaaatcagcttggac
gcactggtggattttgcaattggacaaggatcgcagtggatgttcatcacccctcatgat
atcagcatggtgaaggcgcacgagaggataaagaagcagcaaatggctgctccacgttct
tga
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