KEGG   Camelina sativa (false flax): 104738877
Entry
104738877         CDS       T05044                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1b isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    104738877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csat04121]
    104738877
   03036 Chromosome and associated proteins [BR:csat03036]
    104738877
Enzymes [BR:csat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104738877
Ubiquitin system [BR:csat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104738877
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     104738877
    Noncanonical PRC1 (PRC1.1)
     104738877
    Noncanonical PRC1 (PRC1.3/1.5)
     104738877
    Noncanonical PRC1 (PRC1.6)
     104738877
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-C3HC4_5 zf-RING_6 zf-RING_11 zf-RING_4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 104738877
NCBI-ProteinID: XP_010457391
LinkDB
Position
14:1269064..1279720
AA seq 463 aa
MPALKNLSAADEEYDQLGRNSEADRFNPEANETGGDPEKMDDKDGSGDEEDDVKRDQVEA
EDEEALEEDSKERSKSSSGGEQSESDSEYVDIDLADIRRDVQCSICLGIIRKTRTVMECL
HRFCQECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFDAFIATLFKDIDKYEEEELAFS
QDDETRNKQIQASIARVSQRQSSALAKKKSSGKDAAVLSRPRRSASGSRRRRNCRSMEQD
TSEAHDDDDDQNNGGKDSSSDEPCAPQRKRKKRSKTQPSSSAANNNDNCAGNGTERAHHR
DSRGISPGLVWNAEMLAWGRGGTRSNTRQGHNNQGASSKRNARLNRLVEYLGNLEGNSVE
LDIPLKLISLDATCLPDLVHPYLRCRPTLLVKQLCEYVARQMQLKAEEVELLVSKEGDKA
IGNQTSTEKMQSLKDDETLAMLKVDCISNHGDTIVVYRQKKIG
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgcctgctttgaagaacttgtccgccgccgatgaagagtacgaccaactgggtcggaac
tcagaagctgacagattcaatcccgaagctaacgagacaggaggagatccggagaaaatg
gatgacaaggacggaagtggagatgaggaagacgacgtgaaacgtgaccaagttgaagca
gaggatgaagaagcgttagaagaagattctaaggaaagaagtaagtcttcttcaggagga
gagcaatcagaatcagattcagaatatgtagatattgatctagcggatatccgtagggac
gtgcaatgctccatatgtttaggaattataaggaaaacaaggactgtgatggaatgtctc
caccggttttgccaagagtgcattgataagtcaatgagattggggaacaatgagtgtcct
acttgcaggaaacattgtgcaagccgacgttctttaagagacgacccaaactttgatgct
tttatagcaactttgttcaaagatattgataaatatgaggaggaggaattggcttttagt
caagatgacgagactcgtaataagcagattcaagcatctatagctcgggtatcacaacga
cagtcttcagcccttgcaaaaaaaaagtcttctggtaaagacgcagcagtcttatcgaga
ccccgacgtagtgctagtggctccagaagaagaaggaactgcagaagcatggaacaggat
acatcagaagcccatgatgatgatgatgatcaaaacaacggaggcaaagattcttcttca
gatgagccttgtgccccgcagagaaaacggaaaaagcgctcaaaaactcagccttcttct
tcagctgcaaacaacaacgataactgcgcaggtaatggcacagagcgggcgcatcatagg
gacagcagaggaatatcacctgggcttgtgtggaatgcggaaatgcttgcatggggaaga
ggcggtacacggagtaacacgagacaaggacataataaccagggagctagtagtaagagg
aatgctcgcttgaatagacttgtcgaatatctcgggaacttagagggtaacagtgtcgag
ttggatatacctcttaagcttatctcgctggatgcaacatgtttaccagacttagttcat
ccatatcttcgttgccgacctactttgctagtaaaacaactctgcgaatatgtagctcgc
cagatgcaattgaaggctgaagaggttgaattgttggtgtctaaggaaggagataaggca
atcgggaatcagacctcaacagagaagatgcaaagtcttaaagatgatgaaaccctggca
atgctaaaagttgattgcatttcgaaccatggagatacgattgtagtgtaccgccaaaag
aaaatcggatag

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