Camelina sativa (false flax): 104738912
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Entry
104738912 CDS
T05044
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104738912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104738912
04121 Ubiquitin system [BR:
csat04121
]
104738912
03036 Chromosome and associated proteins [BR:
csat03036
]
104738912
03400 DNA repair and recombination proteins [BR:
csat03400
]
104738912
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104738912
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104738912
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104738912
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104738912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-HC5HC2H_2
zf-C3HC4_3
zf-RING_10
zf-RING_5
zf-C3HC4_4
zf-RING_6
zf-RING_2
PHD_NSD
Prok-RING_4
PTCB-BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
104738912
NCBI-ProteinID:
XP_010457425
LinkDB
All DBs
Position
14:1431200..1434807
Genome browser
AA seq
718 aa
AA seq
DB search
MADFTNMLMNPWVLHLQKLELELKCPLCLKLLNRPVLLPCDHVFCDLCVHKSSKVESSCA
VCKSKYPRKAQRNLHFMESVISIYKSLNSAVSVHLTQLQIPNDCNYKSDALNNSNSPKDG
GSEDSEMTDKDASKLNHGGDFSSHDGSPLPTSEDSSPRPKHQDWTAEKLRDHLPLYEFES
ENDDGNHTPESHKGQAAKSPSDITASEQPGNAARKRICGIHESKLNPMTQDGTLLRLMES
LRSDDPTDYVKVQKHQQLPERHTEQDTKRKRDITAYEAMENHLKVPRREKNLMQKAVDID
CNDNCSANSDDQQIGKTSKASDFKPLIVSDQSSSNITICGFCQSARVSEATGEMLHYSKG
KPVVGDDIFRSNVIHVHSACIEWAPQVYYEGDTVKNLKPELARGMKIKCTKCSLKGAALG
CYVKSCRRSYHVPCAREMSRCRWDYEDFLLLCPAHSSVKFPNEKSGHRVSRAEPLPKTTP
AELCSLEKTPAITKDLVLCGSALSKSDKNLMESLAVKFNATISRYWNPNVTHVIASTDEK
GACTRTLKVLMGILNGKWIINADWMKASLEASQPVDEEPFEIHIDSQGCQDGPKSARLGA
ANNKPKLFDGLKFYFFGDFYQGYKEDLQNLVKVAGGTVLNTEDELGAESSNSADDQRSPI
VVYNIDPPIGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWLLESIAGYKLHPIIS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttaccaacatgctgatgaatccatgggttctccatctccagaagctcgag
ctcgagctcaagtgccctctatgcttgaaattgcttaatcgaccggtgttgcttccttgt
gaccacgttttctgcgatttatgtgtacacaaatcttcgaaagttgaatcaagctgtgct
gtgtgcaaatctaaatatcccagaaaggctcagaggaaccttcatttcatggaaagtgtt
ataagcatatacaaaagcttgaattcagctgttagtgttcatctcacacaattacagatt
cccaatgattgcaactataagagcgatgcactgaacaattccaacagcccaaaagacggt
ggatctgaagattctgagatgactgacaaggatgcaagcaagctcaatcatggtggtgat
ttctctagtcatgatggttctcctcttccaacctcagaagatagtagtccaagacctaag
catcaggattggactgcggagaagttgcgggatcatctcccattatatgagttcgaatca
gagaacgacgatggcaatcatacacctgaaagtcataaaggacaagctgcaaaaagtccg
agtgacatcactgcttctgagcagcctggcaatgctgcaaggaagcgtatttgtggtatc
catgaaagcaaattgaatcctatgactcaggatgggactttgctgcggttgatggagagc
ctccggtcagatgatcccactgattatgttaaagtacagaaacatcagcagttacccgaa
cgtcatacagaacaagatacaaaaaggaaacgtgacatcaccgcttatgaagcaatggag
aatcatctgaaagtccccaggagggagaagaacctgatgcaaaaagctgttgacattgac
tgcaatgataactgctctgcaaactctgatgatcagcaaattggaaaaacctcaaaggca
tcagattttaaaccacttatagtttcggatcaatcgtcatccaacataaccatatgtggg
ttctgccaatccgctagggtgtctgaggccactggagaaatgctgcattactccaaggga
aaaccagtggttggagatgacatcttccggtccaatgttatccatgtccatagtgcatgt
atcgaatgggcaccgcaagtttattatgaaggtgacacagtgaagaacctgaaaccagaa
ctggcaaggggaatgaaaatcaagtgcactaaatgtagtctgaaaggggctgccttaggc
tgctatgtcaagtcttgccggcggagctatcatgttccatgtgcgagggagatgtccaga
tgccgttgggattatgaggactttcttcttctttgtccggctcattcttctgtcaaattc
ccaaacgagaagtctggacatcgcgtatcaagagctgaacccctgccaaaaacgactcct
gctgagctatgttctttggaaaaaacaccagctattacaaaagaccttgttctctgtgga
tcagcactctctaagagtgataagaatctaatggaaagtttagccgttaaattcaatgca
accatatcaaggtactggaacccaaatgttacacatgtgattgcttcaacagacgaaaaa
ggagcttgcacaagaactttgaaggttcttatgggtattctgaatggaaaatggattatc
aatgcagattggatgaaagcaagccttgaagcttctcaacctgttgatgaagaaccattt
gagattcatattgatagtcaaggatgtcaagatggaccgaaatctgcaagactcggagca
gcaaataataaaccaaagctctttgatggcttgaagttctatttctttggagatttctac
caaggatacaaagaagaccttcagaatctagtcaaagttgctggaggtacagtcttgaac
acagaggacgagctaggtgcagaaagcagcaacagtgccgatgaccaaagatcaccgatt
gtggtgtacaacattgatcctccaattggatgtgccttaggggaagaagtcacgattatt
tggcaaagagctaatgacgcggaggctttagctagtcaaactggatctcgcctcgttggt
catacatggcttttggagtccatcgctggttacaagttacaccctattattagctaa
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