Camelina sativa (false flax): 104738994
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Entry
104738994 CDS
T05044
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104738994
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104738994
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104738994
NCBI-ProteinID:
XP_010457526
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Position
14:complement(1803929..1808055)
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AA seq
432 aa
AA seq
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MAVLLPTWVLTMMCLLFFVGAMENTTHNKISSLPRSDETEWNQHAVKNPDEVADEVLALT
EMSVRNHTERRKLGYFTCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRF
YVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNNFKTIDGRGANV
HIANGGCITIQYVTNVIVHGLHIHDCRPTGNAMVRSSETHFGWRTMADGDAISIFGSSHV
WIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNH
FGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTK
RVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAG
ALPCRRGRQCSS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcttcttcccacatgggttttaacaatgatgtgtctactcttcttcgtcgga
gcaatggagaacactactcacaacaagatctcatctctccctagatccgacgaaaccgaa
tggaaccaacacgcagtgaagaatccagatgaagtagcggacgaagttctcgccttgact
gaaatgagtgtgagaaaccataccgagaggaggaagctaggttactttacttgcggaaca
ggcaaccctatcgacgactgttggcggtgcgatcgcaactggcacaagaaccgcaaacgc
ttagcggactgcgggatcgggtttggaagaaacgccatcggtggtcgcgacggtcgtttc
tacgttgtcactgacccgagagacgacaatccggttaatcctagacccgggacattacgt
cacgccgtgatccaagaccgaccgttatggatcgttttcaaacgcgacatggtgattcag
ttgaaacaagagctcatcgttaacaacttcaaaacgatcgatggacgtggcgcaaacgtt
cacatcgctaacggcggttgcatcacgattcagtatgtaacgaacgtgatcgtccacgga
ttacatattcatgattgcagaccgactggtaacgctatggtgagaagttcagagacacat
tttgggtggaggacgatggcggatggtgatgctatttcgatctttggctcgagtcatgtg
tggattgatcataactcgttgtctcattgcgctgacgggctcgtggatgcagtcatgggc
tcaaccgcgataaccatctctaacaaccacttaactcaccacaacgaggtcatgttgctc
ggacatagcgattcgtacatgagggacaaagctatgcaagtgaccattgcttataatcat
tttggagttggacttattcaaagaatgccgaggtgtcgacacgggtacttccatgtcgta
aacaacgactacactcactgggaaatgtacgcgattggtggaagcgcgaacccgacaatc
aacagtcaaggaaaccgctatgccgcccctaaaaacccctttgctaaagaggtcacgaag
agagtggacacaccggctagccattggaaaggatggaactggagatcggaaggagatttg
cttcagaatggtgcttacttcacttcttcaggagccgccgcgtccggaagctacgcacgt
gcctctagtctctccgcgaaatcttcttcattggtcggacacattacttccgatgccgga
gctctaccttgtcgcagaggacgtcaatgttcatcatag
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