Camelina sativa (false flax): 104739233
Help
Entry
104739233 CDS
T05044
Name
(RefSeq) ribosome biogenesis protein bms1-like isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104739233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104739233
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
GTPase
104739233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
AAA_16
AAA_22
AAA
RNA_helicase
Rad17
MMR_HSR1
nSTAND3
AAA_11
AAA_5
AAA_19
Motif
Other DBs
NCBI-GeneID:
104739233
NCBI-ProteinID:
XP_010457818
LinkDB
All DBs
Position
14:complement(2814155..2820986)
Genome browser
AA seq
1179 aa
AA seq
DB search
MAADELMPSHRSHRTRQAGPTMKKKAAIDKMKRGIPITKQKNPKAFAFKSAVKAKKAQSH
AMEKEQRRLHVPTIDRTYNEPPPFVVVVQGPPGVGKSLVIKSLVKEFTKQNVPEVLGPIT
IVEGKHKRYQFVECPNDINGMVDCAKVADLALLVVDGSYGFEMETFEFLNIMQMHGFPRV
IGVLTHLDNFKDASKLRRTKKSLKDRFWTEICKGAKLFYLSGLIHGKYTPREVHNLRRFV
SVVKPQPIRWRTSHPYVLADRMEDVTPPEKVQMDKKCDRNITLYGYLRGCNLKKGMKVHI
AGVGDYSLAGVTALIDPCPLPSAGKRKGLRDRDKLFYAPMSGIGDLLYDKDAVYININDH
QVQYSKTEDGNGEPTNKGKGRDVGEDLVKSLQNTKYSVDEKLEKTFINFFGKKTSASSET
KVMAEDAYQSSPEGSDNEESQDDEDDEKDVEGSDNEIKQVTEFHGGRLRRKAVFKDDIGG
SDAKDSDEDDFEEADDAESDLDEYNSDEADDIELDENEVEDGGDDSASDSPGDYQIDDKD
FGNISQWKAPLKENARKKNPNLMDIVYGASGSLATPLINENHDTSDDEESDEEEFFKPKG
EQSKNLGGGWDVGYVNSEDCSKFLNYGYLKNWKEKDVCESIRDRFTTGDWSKAALRDKNS
GTAIEGEDDELYGDFEDLETGDEHKSHEDMESDASENEDEDAEVVERRLKKLARRAKFDA
ESTKSEFEEDDNDKGDGNNPLSQAKEPGYFDKMKEELEIIKQRNKEELDDLDEETRIKLE
GFRTGTYLRLEIHNVPYEMIEFFDPCHPILVGGIGYGEDNAGYMQTRFKRHRWHKKVLKT
RDPIIVSIGWRRYQTIPIYAIEDPNGRHRMLKYTPEHMHCLATFWGPLAPPDTGIVAFQN
LSNNQAGFRITATSVVIEYNHKARIIKKIKLVGTPCKIKKKTAFIKDMFTSDLEIARFEG
SSVRTVSGIRGQVKKAGKNMLDNNAEEGIARCTFEDQIRMSDMVFLRAWTTVEVPQFYNP
LTTALQSRDKTWKGMKTFGELRRELNIPIPVNKDSLYKKIERKPKKFNPLKISKSLQRDL
PFKSKPKDIPRRKRQSLDARRAVVMEPEERKAHKAIQQFKLLEQHKMKKKKATAQKKREV
YEAEKAKNEEINKKRRREERRERYREEDKQKKKSRRSHD
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacgaattgatgccgtctcacaggtcacataggactcgccaagcaggtcca
accatgaagaagaaagctgcaatcgataagatgaagcgtggtatccccattaccaagcag
aagaaccctaaggcgtttgcttttaaatcggctgtcaaggcgaagaaagcgcaatctcac
gctatggagaaggagcaaagacgacttcatgtcccgacaattgatcgtacttataacgaa
cctcctcctttcgtcgtcgttgttcaaggccccccaggagttggaaagtctctcgtgatt
aagtctcttgtgaaggaattcaccaagcagaatgtaccggaggttcttggacctattacc
attgtagaaggtaagcataagcggtatcagtttgtggagtgcccaaatgatatcaatgga
atggtggattgtgcaaaggttgctgatctagccttgcttgtggtagacgggagttatggt
tttgagatggaaacctttgaattcctcaatattatgcaaatgcatggatttcctagagtt
attggtgtcctcacacaccttgataacttcaaggatgcaagcaagctgaggagaacaaaa
aagtctctcaaggatcggttttggaccgaaatatgtaaaggagctaaattgttctatcta
tctggtctcattcatgggaagtatacaccgcgtgaagttcacaacctccgccgctttgta
tctgttgtcaagcctcagccaataaggtggcgaacatcacatccttatgtgttggctgat
cgcatggaagatgttacccctcccgagaaagttcagatggataaaaaatgcgatagaaat
atcacattgtatggttacctacgtggttgtaacttgaaaaaagggatgaaggttcatatt
gctggagttggtgactacagtttagctggggtgactgccttaattgatccttgtccttta
ccttcagctggcaagcgaaaggggctgagggacagggataagcttttttatgctcctatg
tccgggattggagatcttctgtatgacaaagatgctgtttacatcaacataaatgatcac
caagttcagtactctaaaactgaagatggaaatggagaacctactaataaaggaaagggc
agagatgttggtgaagatttggtaaagtcgttgcagaacacaaagtattctgttgatgag
aaactggaaaagacattcattaacttttttggcaaaaagaccagtgccagctcagaaaca
aaagttatggctgaagatgcgtatcaatcttcaccggaaggttctgacaacgaggagtct
caagatgatgaggatgatgaaaaggatgtagagggtagtgacaacgaaataaagcaggta
actgagtttcatggtggaaggttgaggaggaaagctgtcttcaaggatgacattggtggg
agcgatgcaaaggactcagatgaagatgattttgaggaagcagacgatgctgaatcggac
ttagatgaatataactctgatgaagcagatgatattgaattggacgaaaatgaagttgaa
gatggtggagatgactctgcttctgattcaccaggggattatcagatagatgataaggac
tttggtaacatatcacagtggaaagcacccttgaaggagaatgccagaaagaagaacccc
aacttgatggacattgtgtatggagcatcgggatcattagctactcccttgataaatgag
aaccatgacactagtgatgatgaagaaagtgatgaggaagaattctttaagccaaaagga
gaacaaagcaagaatttaggtggtggatgggatgtgggatatgtcaactcagaggattgt
tctaaatttctgaattatggttacctaaagaattggaaagagaaagacgtctgtgagagc
attcgtgatcgatttaccacgggtgattggtcaaaagctgctctgagagacaaaaattca
ggtactgccattgagggagaagatgatgaactttatggtgattttgaggatcttgagacg
ggagacgagcataaaagccatgaggacatggaatcagatgcatctgaaaatgaagatgaa
gatgctgaagtcgttgagcgtaggctaaaaaagctggctcgccgagcaaagtttgatgcc
gaaagcacgaaatccgagtttgaggaggatgacaatgataaaggtgatgggaacaatcca
cttagtcaagccaaggaaccaggatactttgataaaatgaaggaagagcttgaaattata
aaacagaggaataaggaagaactcgatgatcttgacgaggaaactcgaattaagttagaa
ggattccggactggaacatacttgaggctggagattcacaatgttccttatgagatgatt
gaattctttgatccttgtcatccaattctggttggaggtattggttacggcgaggacaat
gctggatatatgcagacccggtttaagagacataggtggcacaagaaagtactaaagact
agagatcctatcattgtgtcgatcggatggagacgctatcagactattcccatatatgcc
attgaagatcccaatggcagacatcgaatgctcaagtatactccagaacacatgcactgc
cttgctacgttctggggtcctcttgctccacccgacaccggtattgtcgctttccagaat
ctgtcaaataatcaggcagggtttaggataacagcgacttctgtagttattgagtataat
cacaaggcccgtattataaagaaaatcaagcttgttgggactccctgcaagatcaagaaa
aagactgcatttatcaaagacatgttcacttctgacctagaaatagctcgatttgaaggt
tcatctgtccgaacagttagtggcattagaggacaagttaaaaaggctggaaaaaatatg
ctcgataacaatgctgaagaagggattgcgaggtgtacctttgaagatcaaatccgtatg
agcgacatggtcttcttaagggcttggacaacagtggaagttccacaattttacaatcct
ctaacgacagccttgcaatcccgcgataagacgtggaaagggatgaaaacttttggagaa
ctccgtagagagctgaatattcctattccggtgaataaggattcactctacaagaaaatc
gaaagaaagccaaagaaattcaatccgttaaagatatcaaagagtctacaaagagatcta
ccgtttaaatcgaaaccgaaggatataccgaggcggaaaagacagtcgctagatgcgaga
agagctgttgtaatggaaccggaagaaagaaaagctcataaagccatccagcaatttaag
ctacttgaacagcacaagatgaagaagaaaaaagcaacggcgcagaagaagagggaagtg
tatgaagcagagaaagctaagaatgaggaaataaataagaaacggaggagagaggagaga
cgtgagagatatcgtgaggaagataaacagaagaagaagagtagaagaagccatgattaa
DBGET
integrated database retrieval system
