Camelina sativa (false flax): 104739252
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Entry
104739252 CDS
T05044
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104739252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104739252
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104739252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
104739252
NCBI-ProteinID:
XP_010457881
LinkDB
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Position
1:3021304..3024862
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AA seq
495 aa
AA seq
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MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPSVA
EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT
ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV
KRAVPKELSPGPTRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPGGA
GRSGFASFNSGYGMNVNFEQGLPTGFTGGTNFNGNVDYGRGMSPYYIGNTNRFGPAVGYE
GGSGGGNSSFFSSVTRNLWGNNGGLNYNNNTTNSNSNTYMGGSSSGNNTLSGPFGNSGVN
WGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAVPSSSFSSASATNNS
GYDAAGLAEFYGNGAVYSDPTWRSPTPEAEGPASFSYGIGGGGPSSDVSARSSSPGYVGS
YSVNKRQSNRGEPSR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggataatggaaagcttttcatcggtgggatatcttgggacaccaatgaggaa
cgcctcaaggagtatttcagcagttttggtgaagtgatcgaggctgtcatcttgaaagat
cgtaccactggtcgtgctcgtggcttcggttttgttgtctttgctgatccttctgttgct
gagattgttatcaccgaaaagcataacattgatggccgcttggtcgaagctaagaaagct
gttcccagagatgatcaaaacatggttaatagaagcaacagcagcagcatccaaggttct
cccggtggtccaggtcgcactaggaagatttttgttggaggattaccttcttccgttaca
gagagcgatttcaagacttattttgaacagtttgggacaactactgatgtggttgttatg
tatgatcacaacacacaaaggcctagaggtttcggtttcataacctacgattccgaggag
gccgttgaaaaggtattgctcaagacgttccatgaactaaatggtaaaatggttgaggtt
aagcgagctgttccaaaggagttatctcctggtccaactcgcagcccgcttggtgcaggt
tacagctacggagttaatagggtcaataacctccttaatggatatgctcaaggatttaat
cctgcagcagttggaggctatggacttaggatggatggtcgtttcagtcctggtggtgct
ggaagaagcggctttgcaagctttaattctggctacgggatgaatgtgaacttcgagcaa
ggattgcccacagggttcactggaggtacaaacttcaatggcaacgttgactatggccga
ggaatgagcccttactacattggtaacacaaaccggtttggtcctgcggttggctatgaa
gggggaagtggaggaggaaactcatccttcttcagttcggttacacggaacctatgggga
aacaatgggggtcttaactataacaacaacactacaaactcaaattccaatacatacatg
ggaggatcatcaagtgggaacaacacacttagtggtccatttggcaattcgggagtcaat
tggggtgctcctggaggaggaaacaatgctgttagtaatgagaatgtcaagtttggttat
ggaggaaacggtgaatctggttttgggttgggaactggtggttatgcagcaagaaaccca
ggggctaacaaggcagtaccatcgtcttcattctcttctgcctcggcaaccaacaacagt
ggttacgatgcagcaggactcgcagagttttatgggaatggtgcagtttatagtgatccc
acatggagatcaccaactcctgaggcagaagggcctgcttcttttagctatggcattgga
ggagggggtccttcttcagatgtttcagctagaagttcatctccaggttatgttggcagt
tacagtgtgaacaagagacaatcaaacagaggcgagccatcacggtga
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