Camelina sativa (false flax): 104739304
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Entry
104739304 CDS
T05044
Name
(RefSeq) zinc finger CCCH domain-containing protein 4-like isoform X2
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104739304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104739304
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104739304
Complex C
104739304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
RRM_3
zf-CCCH_3
zf-CCCH_10
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
104739304
NCBI-ProteinID:
XP_010457909
UniProt:
A0ABM0VL91
LinkDB
All DBs
Position
14:complement(3061233..3064606)
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AA seq
490 aa
AA seq
DB search
MAHRILRDHEANGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE
EHDRKTRAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPEDESIKTLYVGGLNSRIL
EQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKAAQELANRLVVNGQRLKLTWGR
PRPEQGSNQQGSVAHSGLLPRAVISQQHNQPPPMQQYYMQPPSANQDKPYYPSMDPQRMG
AVISNQEAGGSSTIDNSGASSSSYMMPPHQSYPPAPYGYMPPPYQQQYPPNHHQHPGPMQ
HYAPPPAAYPYPEQPGPGSRPAPSPAAVSAPSPDSAPAGSAGAPSGSAGTPSGSSQQPPA
AASTATGSSQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaggatacttagagatcatgaagccaatggatgggaacgctccgatttccca
atcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgactaaagcgaattac
gataaggaatgcaagatatgtacaagacctttcacggtgtttaggtggagacctggccgg
gatgctagatacaagaagaccgaaatttgtcagacttgttgcaagttgaaaaacgtgtgc
caagtttgtcttctggatcttgagtatggtcttccagttcaggtcagggacacagcactc
aacattagtactcatgactctatccctaaaagtgatgtcaacagagagtactttgctgaa
gagcacgacaggaagactagagctggactggattatgaatcctcattcgggaagatgcga
cctaatgatactattttaaagcttcaaagaacaacgccatactataaaaggaaccgagca
catgtttgtagtttcttcatcaggggtgagtgtacaagaggtgccgaatgtccataccgg
catgagatgcccgaaacaggagagctgtcccagcaaaacataaaagaccgttattatggt
gttaatgatccagttgctatgaagttacttggaaaagccggtgagatgggcactttggaa
tcaccagaggatgaaagcatcaaaacgctttacgtcggtggactgaactcaagaatcctg
gagcaagacatacgagaccaattctacgcctatggagaaatcgaatctatcagaatcttg
gctgacaaagcctgtgcgtttgtcacatacacatcccgtgaaggtgcagagaaggctgca
caagagctcgccaacaggctagtcgtcaacggtcagaggctaaaactcacatggggaaga
cccagacctgagcaaggttccaaccaacagggcagtgtggctcatagtggtttactacct
cgagcagttatatctcagcagcacaatcagcccccaccaatgcagcagtactatatgcag
ccaccatcagctaaccaagacaaaccttattacccatcaatggatccacagagaatgggt
gcagtcatttcaaatcaagaggctggtggttcaagcaccattgacaacagcggagcttca
tcttcttcttacatgatgcctccacaccagtcatacccaccagcaccatatggatatatg
ccaccgccttaccagcagcagtatcctcctaaccatcatcagcatcctggtcctatgcag
cactatgccccgcctccagcagcttacccgtacccagagcaacctggtcctggatcaaga
cctgcaccatctccagccgcggtctctgctccatcacctgattctgcacctgctgggtct
gcaggagcaccttctgggtctgcaggaacaccttcaggatcctctcaacaacctcctgct
gctgcttctactgcaactggttcgtctcaatag
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